Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_025255.1 Length=11135 Score E Sequences producing significant alignments: (Bits) Value seq8251 138 8e-29 seq1814 138 8e-29 seq1440 138 8e-29 seq9517 132 3e-27 seq2296 107 1e-19 >seq8251 Length=2688 Score = 138 bits (152), Expect = 8e-29 Identities = 247/356 (69%), Gaps = 10/356 (3%) Strand=Plus/Plus Query 6309 GGAAGATTCTTTTCTTTGATGTCCTGGAAGCTCAGAGAGTATTTTGTCATCACTGAGTAT 6368 |||||||| ||| || | ||| ||| || | || || |||||||| || |||||| Sbjct 278 GGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTAT 337 Query 6369 TTGATTAAGACGCACTTTGTCCCGATGTTTAAAGGGTTGACCATGGCGGATGACTTGACA 6428 |||||||||| ||| ||||| || | | || ||| || || ||||| || |||| || Sbjct 338 TTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAAC 397 Query 6429 GCGGTGATAAAGAAGATGATGGACACATCTTCAGGAC--AAGGCTTAGA-TAATTATGAA 6485 | || | || ||||||||| | | || || |||| | || ||| | || |||| Sbjct 398 ACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAG 457 Query 6486 TCCATTTGTATAGCCAACCATATTGACTATGAGAAGTGGAACAATCATCAAAGAAAAGAG 6545 | | ||||| || ||| |||| |||||||||||||||||| |||||||| ||| Sbjct 458 GCGA---CCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAG 514 Query 6546 TCGAACGGGCCCGTGTTCAAGGTGATGGGTCAATTCTTGGGATATCCACGTCTGATTGAG 6605 || | || || ||| || ||||||| ||| || |||| || | || || | Sbjct 515 GGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACG 574 Query 6606 AGAACTCATGAATTTTTTGAGAAGAGTC--TGATATATTACAATGGACGACCAGAT 6659 ||||| |||||||| ||| | || || | | |||||||| | ||||||||| Sbjct 575 AGAACACATGAATTCTTTCGG--GATTCATTCTTCTATTACAAAGATCGACCAGAT 628 >seq1814 Length=63972 Score = 138 bits (152), Expect = 8e-29 Identities = 247/356 (69%), Gaps = 10/356 (3%) Strand=Plus/Plus Query 6309 GGAAGATTCTTTTCTTTGATGTCCTGGAAGCTCAGAGAGTATTTTGTCATCACTGAGTAT 6368 |||||||| ||| || | ||| ||| || | || || |||||||| || |||||| Sbjct 1684 GGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTAT 1743 Query 6369 TTGATTAAGACGCACTTTGTCCCGATGTTTAAAGGGTTGACCATGGCGGATGACTTGACA 6428 |||||||||| ||| ||||| || | | || ||| || || ||||| || |||| || Sbjct 1744 TTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAAC 1803 Query 6429 GCGGTGATAAAGAAGATGATGGACACATCTTCAGGAC--AAGGCTTAGA-TAATTATGAA 6485 | || | || ||||||||| | | || || |||| | || ||| | || |||| Sbjct 1804 ACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAG 1863 Query 6486 TCCATTTGTATAGCCAACCATATTGACTATGAGAAGTGGAACAATCATCAAAGAAAAGAG 6545 | | ||||| || ||| |||| |||||||||||||||||| |||||||| ||| Sbjct 1864 GCGA---CCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAG 1920 Query 6546 TCGAACGGGCCCGTGTTCAAGGTGATGGGTCAATTCTTGGGATATCCACGTCTGATTGAG 6605 || | || || ||| || ||||||| ||| || |||| || | || || | Sbjct 1921 GGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACG 1980 Query 6606 AGAACTCATGAATTTTTTGAGAAGAGTC--TGATATATTACAATGGACGACCAGAT 6659 ||||| |||||||| ||| | || || | | |||||||| | ||||||||| Sbjct 1981 AGAACACATGAATTCTTTCGG--GATTCATTCTTCTATTACAAAGATCGACCAGAT 2034 >seq1440 Length=90230 Score = 138 bits (152), Expect = 8e-29 Identities = 247/359 (69%), Gaps = 4/359 (1%) Strand=Plus/Plus Query 6309 GGAAGATTCTTTTCTTTGATGTCCTGGAAGCTCAGAGAGTATTTTGTCATCACTGAGTAT 6368 |||||||| ||| || | ||| ||| || | || || |||||||| || |||||| Sbjct 52022 GGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTAT 52081 Query 6369 TTGATTAAGACGCACTTTGTCCCGATGTTTAAAGGGTTGACCATGGCGGATGACTTGACA 6428 |||||||||| ||| ||||| || | | || ||| || || ||||| || |||| || Sbjct 52082 TTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAAC 52141 Query 6429 GCGGTGATAAAGAAGATGATGGACACATCTTCAGGACAAGGCTTAGATAATTATGAATCC 6488 | || | || ||||||||| | | || || ||||| | | | |||||| Sbjct 52142 ACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCACAGTTATGATGAG 52201 Query 6489 ATTTGTATAGCCAACCATATTGACTATGAGAAGTGGAACAATCATCAAAGAAAAGAGTCG 6548 | ||||| || ||| |||| |||||||||||||||||| |||||||| ||| Sbjct 52202 GTGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGA 52261 Query 6549 AACGGGCCCGTGTTCAAGGTGATGGGTCAATTCTTGGGATATCCACGTCTGATTGAGAGA 6608 || | || || ||| || ||||||| ||| || |||| || | || || |||| Sbjct 52262 AATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGA 52321 Query 6609 ACTCATGAATTTTTTGAGAAGAGTC--TGATATATTACAATGGACGACCAGATCTGATG 6665 || |||||||| ||| | || || | | |||||||| | ||||||||| | ||| Sbjct 52322 ACACATGAATTCTTTCGG--GATTCATTCTTCTATTACAAAGATCGACCAGATTTAATG 52378 >seq9517 Length=2557 Score = 132 bits (146), Expect = 3e-27 Identities = 246/356 (69%), Gaps = 10/356 (3%) Strand=Plus/Plus Query 6309 GGAAGATTCTTTTCTTTGATGTCCTGGAAGCTCAGAGAGTATTTTGTCATCACTGAGTAT 6368 |||||||| ||| || | ||| ||| || | || || |||||||| || |||||| Sbjct 603 GGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTAT 662 Query 6369 TTGATTAAGACGCACTTTGTCCCGATGTTTAAAGGGTTGACCATGGCGGATGACTTGACA 6428 |||||||||| ||| ||||| || | | || ||| || || ||||| || |||| | Sbjct 663 TTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAAC 722 Query 6429 GCGGTGATAAAGAAGATGATGGACACATCTTCAGGACAAGGC--TTAGA-TAATTATGAA 6485 | || | || ||||||||| | | || || ||||| | | ||| | || |||| Sbjct 723 ACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAG 782 Query 6486 TCCATTTGTATAGCCAACCATATTGACTATGAGAAGTGGAACAATCATCAAAGAAAAGAG 6545 | | ||||| || ||| |||| |||||||||||||||||| |||||||| ||| Sbjct 783 GCGACC---ATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAG 839 Query 6546 TCGAACGGGCCCGTGTTCAAGGTGATGGGTCAATTCTTGGGATATCCACGTCTGATTGAG 6605 || | || || ||| || ||||||| ||| || |||| || | || || | Sbjct 840 GGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACG 899 Query 6606 AGAACTCATGAATTTTTTGAGAAGAGTC--TGATATATTACAATGGACGACCAGAT 6659 ||||| |||||||| ||| | || || | | |||||||| | ||||||||| Sbjct 900 AGAACACATGAATTCTTTCGG--GATTCATTCTTCTATTACAAAGATCGACCAGAT 953 >seq2296 Length=40579 Score = 107 bits (118), Expect = 1e-19 Identities = 166/234 (71%), Gaps = 6/234 (3%) Strand=Plus/Plus Query 6309 GGAAGATTCTTTTCTTTGATGTCCTGGAAGCTCAGAGAGTATTTTGTCATCACTGAGTAT 6368 |||||||| ||| || | ||| ||| || | || || |||||||| || |||||| Sbjct 1747 GGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTAT 1806 Query 6369 TTGATTAAGACGCACTTTGTCCCGATGTTTAAAGGGTTGACCATGGCGGATGACTTGACA 6428 |||||||||| ||| ||||| || | | || ||| || || ||||| || |||| | Sbjct 1807 TTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAAC 1866 Query 6429 GCGGTGATAAAGAAGATGATGGACACATCTTCAGGAC--AAGGCTTAGA-TAATTATGAA 6485 | || | || ||||||||| | | || || |||| | || ||| | || |||| Sbjct 1867 ACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAG 1926 Query 6486 TCCATTTGTATAGCCAACCATATTGACTATGAGAAGTGGAACAATCATCAAAGA 6539 | | ||||| || ||| |||| |||||||||||||||||| |||||||| Sbjct 1927 GCGA---CCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGA 1977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35496586057240