Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_025341.1
Length=11139
Score E
Sequences producing significant alignments: (Bits) Value
seq1440 95.1 9e-16
seq9517 87.8 1e-13
seq8251 87.8 1e-13
seq1814 87.8 1e-13
>seq1440
Length=90230
Score = 95.1 bits (104), Expect = 9e-16
Identities = 275/412 (67%), Gaps = 25/412 (6%)
Strand=Plus/Plus
Query 6270 ATCGGATTGAAAGGGAAAGAGAGAGAAGTGAAAGTAAAAGGACGGTTCTTTTCACTCATG 6329
||||| ||| || ||||| ||| ||||| |||||||| | || ||| | ||||||
Sbjct 51986 ATCGGTCTGAGAGCAAAAGA---AGAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATG 52042
Query 6330 TCGTGGAAACTAAGAGAATATTTTGTTGTCACAGAATACCTAATCAAAGAACATTTCGTC 6389
||| || | || || ||||| | || || || | || || | ||||| ||
Sbjct 52043 AGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTT 52102
Query 6390 CCTCTCTTCAATGGATTGACTATGGCGGATGACATGACCACCGTAAT-ATCAAAACTAAT 6448
||||||| | ||||| || ||||| || ||| || ||||||| | | ||| | | ||
Sbjct 52103 CCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGA-TGAT 52161
Query 6449 GGATCGCACTCAGGGCCAAGGAGGAGAGGACT-ACACCCAAGTT----TG--CATTGCTA 6501
| | || ||| ||| ||| ||| ||| | | | || ||| || |
Sbjct 52162 GCAA-GCT-TCATCT----GGAC-AGACCACTCACAGTTATGATGAGGTGACCATAGCAA 52214
Query 6502 ATCATATCGATTATGAAAAGTGGAACAATCATCAGAGAAAGCGTGCAACCGGACCTGTGT 6561
||||| | |||||||| |||||||||||| |||| ||| | || | || || |
Sbjct 52215 ATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCT 52274
Query 6562 TCATAGTCATGGGACAATTCCTTGGATTTCCTAAACTGATCTATAGAACACATGAGTTCT 6621
|| ||||||||| | ||| ||||||| ||||| || | ||||||||||| ||||
Sbjct 52275 TCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCT 52334
Query 6622 TT---GAATCTAGCTGGGTGTATTACAATGCTAGACCTGATTTAATGGTCAT 6670
|| || || || | |||||||| | | |||| ||||||||||| ||
Sbjct 52335 TTCGGGATTCATTCT---TCTATTACAAAGATCGACCAGATTTAATGGTTAT 52383
>seq9517
Length=2557
Score = 87.8 bits (96), Expect = 1e-13
Identities = 128/180 (71%), Gaps = 6/180 (3%)
Strand=Plus/Plus
Query 6494 CATTGCTAATCATATCGATTATGAAAAGTGGAACAATCATCAGAGAAAGCGTGCAACCGG 6553
||| || |||||| | |||||||| |||||||||||| |||| ||| | || |
Sbjct 788 CATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGA 847
Query 6554 ACCTGTGTTCATAGTCATGGGACAATTCCTTGGATTTCCTAAACTGATCTATAGAACACA 6613
|| || ||| ||||||||| | ||| ||||||| ||||| || | ||||||||
Sbjct 848 TCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACA 907
Query 6614 TGAGTTCTTT---GAATCTAGCTGGGTGTATTACAATGCTAGACCTGATTTAATGGTCAT 6670
||| |||||| || || || | |||||||| | | |||| |||||||| || ||
Sbjct 908 TGAATTCTTTCGGGATTCATTCT---TCTATTACAAAGATCGACCAGATTTAATAGTTAT 964
>seq8251
Length=2688
Score = 87.8 bits (96), Expect = 1e-13
Identities = 128/180 (71%), Gaps = 6/180 (3%)
Strand=Plus/Plus
Query 6494 CATTGCTAATCATATCGATTATGAAAAGTGGAACAATCATCAGAGAAAGCGTGCAACCGG 6553
||| || |||||| | |||||||| |||||||||||| |||| ||| | || |
Sbjct 463 CATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGA 522
Query 6554 ACCTGTGTTCATAGTCATGGGACAATTCCTTGGATTTCCTAAACTGATCTATAGAACACA 6613
|| || ||| ||||||||| | ||| ||||||| ||||| || | ||||||||
Sbjct 523 TCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACA 582
Query 6614 TGAGTTCTTT---GAATCTAGCTGGGTGTATTACAATGCTAGACCTGATTTAATGGTCAT 6670
||| |||||| || || || | |||||||| | | |||| |||||||| || ||
Sbjct 583 TGAATTCTTTCGGGATTCATTCT---TCTATTACAAAGATCGACCAGATTTAATAGTTAT 639
>seq1814
Length=63972
Score = 87.8 bits (96), Expect = 1e-13
Identities = 128/180 (71%), Gaps = 6/180 (3%)
Strand=Plus/Plus
Query 6494 CATTGCTAATCATATCGATTATGAAAAGTGGAACAATCATCAGAGAAAGCGTGCAACCGG 6553
||| || |||||| | |||||||| |||||||||||| |||| ||| | || |
Sbjct 1869 CATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGA 1928
Query 6554 ACCTGTGTTCATAGTCATGGGACAATTCCTTGGATTTCCTAAACTGATCTATAGAACACA 6613
|| || ||| ||||||||| | ||| ||||||| ||||| || | ||||||||
Sbjct 1929 TCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACA 1988
Query 6614 TGAGTTCTTT---GAATCTAGCTGGGTGTATTACAATGCTAGACCTGATTTAATGGTCAT 6670
||| |||||| || || || | |||||||| | | |||| |||||||| || ||
Sbjct 1989 TGAATTCTTTCGGGATTCATTCT---TCTATTACAAAGATCGACCAGATTTAATAGTTAT 2045
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35509378772280
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |