Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_025353.1 Length=11070 Score E Sequences producing significant alignments: (Bits) Value seq1440 109 4e-20 seq9517 105 5e-19 seq8251 105 5e-19 seq1814 105 5e-19 seq2296 96.9 2e-16 >seq1440 Length=90230 Score = 109 bits (120), Expect = 4e-20 Identities = 251/373 (67%), Gaps = 14/373 (4%) Strand=Plus/Plus Query 6230 GGAA-GATTTGGTCATCGGGCTGAAAGGGAAAGAACGAG----AATTAAAATTGGCCGGC 6284 |||| || || || ||||| |||| || |||||| ||| || ||||| || Sbjct 51972 GGAATGAATTAGTGATCGGTCTGAGAGCAAAAGAA-GAGCTGAAACTAAAA------GGA 52024 Query 6285 AGAtttttttCTCTTATGTCCTGGAAGTTGAGAGAATATTTCGTCATTACGGAGTATTTA 6344 ||||||||| |||| ||| ||| | | || || || ||||| ||||||||||| Sbjct 52025 AGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTG 52084 Query 6345 ATAAAGACACATTTTGTCCCCATGTTTAAGGGATTGACAATGGCAGATGA-TCTAACAGC 6403 || |||| |||||||| || | | || ||||| |||||||| || || | |||| | Sbjct 52085 ATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACA-C 52143 Query 6404 TGTCATAAAGAAAATGATGGATACCTCATCAGGACAGGGTTTGGATAATTACGACTCAAT 6463 || | || || |||||| | | ||||| |||||| | | ||| || | Sbjct 52144 CGTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCACAGTTATGATGAGGT 52203 Query 6464 TTGCATAGCCAATCACATTGATTATGAGAAGTGGAACAATCACCAGCGGAAAGAATCCAA 6523 |||||| ||||| ||||||||||||||||||||||| | || | || || Sbjct 52204 GACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAA 52263 Query 6524 TGGTCCTGTTTTTAGGGTAATGGGACAATTCCTTGGCTACCCCAATTTGATTGAACGCAC 6583 || ||| || || || ||||| | ||| |||| | || |||||| || | || Sbjct 52264 TGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAAC 52323 Query 6584 CCATGAATTCTTT 6596 |||||||||||| Sbjct 52324 ACATGAATTCTTT 52336 >seq9517 Length=2557 Score = 105 bits (116), Expect = 5e-19 Identities = 253/376 (67%), Gaps = 20/376 (5%) Strand=Plus/Plus Query 6230 GGAA-GATTTGGTCATCGGGCTGAAAGGGAAAGAACGAG----AATTAAAATTGGCCGGC 6284 |||| || || || ||||| |||| || |||||| ||| || ||||| || Sbjct 553 GGAATGAGTTAGTGATCGGTCTGAGAGCAAAAGAA-GAGCTGAAACTAAAA------GGA 605 Query 6285 AGAtttttttCTCTTATGTCCTGGAAGTTGAGAGAATATTTCGTCATTACGGAGTATTTA 6344 ||||||||| |||| ||| ||| | | || || || ||||| ||||||||||| Sbjct 606 AGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTG 665 Query 6345 ATAAAGACACATTTTGTCCCCATGTTTAAGGGATTGACAATGGCAGATGA-TCTAACAGC 6403 || |||| |||||||| || | | || ||||| |||||||| || || | |||| | Sbjct 666 ATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACA-C 724 Query 6404 TGTCATAAAGAAAATGATGGATACCTCATCAGGACAG---GGTTTGGATAATTACGACTC 6460 || | || || |||||| | | ||||| |||||| | | | || | || | Sbjct 725 CGTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGC 784 Query 6461 AATTTGCATAGCCAATCACATTGATTATGAGAAGTGGAACAATCACCAGCGGAAAGAATC 6520 | |||||| ||||| ||||||||||||||||||||||| | || | || Sbjct 785 GA---CCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGG 841 Query 6521 CAATGGTCCTGTTTTTAGGGTAATGGGACAATTCCTTGGCTACCCCAATTTGATTGAACG 6580 |||| ||| || || || ||||| | ||| |||| | || |||||| || | Sbjct 842 AAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAG 901 Query 6581 CACCCATGAATTCTTT 6596 || |||||||||||| Sbjct 902 AACACATGAATTCTTT 917 >seq8251 Length=2688 Score = 105 bits (116), Expect = 5e-19 Identities = 253/376 (67%), Gaps = 20/376 (5%) Strand=Plus/Plus Query 6230 GGAA-GATTTGGTCATCGGGCTGAAAGGGAAAGAACGAG----AATTAAAATTGGCCGGC 6284 |||| || || || ||||| |||| || |||||| ||| || ||||| || Sbjct 228 GGAATGAGTTAGTGATCGGTCTGAGAGCAAAAGAA-GAGCTGAAACTAAAA------GGA 280 Query 6285 AGAtttttttCTCTTATGTCCTGGAAGTTGAGAGAATATTTCGTCATTACGGAGTATTTA 6344 ||||||||| |||| ||| ||| | | || || || ||||| ||||||||||| Sbjct 281 AGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTG 340 Query 6345 ATAAAGACACATTTTGTCCCCATGTTTAAGGGATTGACAATGGCAGATGA-TCTAACAGC 6403 || |||| |||||||| || | | || ||||| |||||||| || || | |||| | Sbjct 341 ATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACA-C 399 Query 6404 TGTCATAAAGAAAATGATGGATACCTCATCAGGACAG---GGTTTGGATAATTACGACTC 6460 || | || || |||||| | | ||||| |||||| | | | || | || | Sbjct 400 CGTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGC 459 Query 6461 AATTTGCATAGCCAATCACATTGATTATGAGAAGTGGAACAATCACCAGCGGAAAGAATC 6520 | |||||| ||||| ||||||||||||||||||||||| | || | || Sbjct 460 GA---CCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGG 516 Query 6521 CAATGGTCCTGTTTTTAGGGTAATGGGACAATTCCTTGGCTACCCCAATTTGATTGAACG 6580 |||| ||| || || || ||||| | ||| |||| | || |||||| || | Sbjct 517 AAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAG 576 Query 6581 CACCCATGAATTCTTT 6596 || |||||||||||| Sbjct 577 AACACATGAATTCTTT 592 >seq1814 Length=63972 Score = 105 bits (116), Expect = 5e-19 Identities = 253/376 (67%), Gaps = 20/376 (5%) Strand=Plus/Plus Query 6230 GGAA-GATTTGGTCATCGGGCTGAAAGGGAAAGAACGAG----AATTAAAATTGGCCGGC 6284 |||| || || || ||||| |||| || |||||| ||| || ||||| || Sbjct 1634 GGAATGAGTTAGTGATCGGTCTGAGAGCAAAAGAA-GAGCTGAAACTAAAA------GGA 1686 Query 6285 AGAtttttttCTCTTATGTCCTGGAAGTTGAGAGAATATTTCGTCATTACGGAGTATTTA 6344 ||||||||| |||| ||| ||| | | || || || ||||| ||||||||||| Sbjct 1687 AGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTG 1746 Query 6345 ATAAAGACACATTTTGTCCCCATGTTTAAGGGATTGACAATGGCAGATGA-TCTAACAGC 6403 || |||| |||||||| || | | || ||||| |||||||| || || | |||| | Sbjct 1747 ATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACA-C 1805 Query 6404 TGTCATAAAGAAAATGATGGATACCTCATCAGGACAG---GGTTTGGATAATTACGACTC 6460 || | || || |||||| | | ||||| |||||| | | | || | || | Sbjct 1806 CGTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGC 1865 Query 6461 AATTTGCATAGCCAATCACATTGATTATGAGAAGTGGAACAATCACCAGCGGAAAGAATC 6520 | |||||| ||||| ||||||||||||||||||||||| | || | || Sbjct 1866 GA---CCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGG 1922 Query 6521 CAATGGTCCTGTTTTTAGGGTAATGGGACAATTCCTTGGCTACCCCAATTTGATTGAACG 6580 |||| ||| || || || ||||| | ||| |||| | || |||||| || | Sbjct 1923 AAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAG 1982 Query 6581 CACCCATGAATTCTTT 6596 || |||||||||||| Sbjct 1983 AACACATGAATTCTTT 1998 >seq2296 Length=40579 Score = 96.9 bits (106), Expect = 2e-16 Identities = 195/283 (69%), Gaps = 20/283 (7%) Strand=Plus/Plus Query 6230 GGAA-GATTTGGTCATCGGGCTGAAAGGGAAAGAACGAG----AATTAAAATTGGCCGGC 6284 |||| || || || ||||| |||| || |||||| ||| || ||||| || Sbjct 1697 GGAATGAGTTAGTGATCGGTCTGAGAGCAAAAGAA-GAGCTGAAACTAAAA------GGA 1749 Query 6285 AGAtttttttCTCTTATGTCCTGGAAGTTGAGAGAATATTTCGTCATTACGGAGTATTTA 6344 ||||||||| |||| ||| ||| | | || || || ||||| ||||||||||| Sbjct 1750 AGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTG 1809 Query 6345 ATAAAGACACATTTTGTCCCCATGTTTAAGGGATTGACAATGGCAGATGA-TCTAACAGC 6403 || |||| |||||||| || | | || ||||| |||||||| || || | |||| | Sbjct 1810 ATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACA-C 1868 Query 6404 TGTCATAAAGAAAATGATGGATACCTCATCAGGACAG---GGTTTGGATAATTACGACTC 6460 || | || || |||||| | | ||||| |||||| | | | || | || | Sbjct 1869 CGTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGC 1928 Query 6461 AATTTGCATAGCCAATCACATTGATTATGAGAAGTGGAACAAT 6503 | |||||| ||||| ||||||||||||||||||||||| Sbjct 1929 GA---CCATAGCAAATCATGTTGATTATGAGAAGTGGAACAAT 1968 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35288704437840