Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_025356.1
Length=11097
Score E
Sequences producing significant alignments: (Bits) Value
seq1440 93.3 3e-15
seq9517 91.5 1e-14
seq8251 89.7 4e-14
seq1814 89.7 4e-14
>seq1440
Length=90230
Score = 93.3 bits (102), Expect = 3e-15
Identities = 310/469 (66%), Gaps = 20/469 (4%)
Strand=Plus/Plus
Query 6343 GGAAGATTCTTTTCCCTGATGTCCTGGCAACTGAGAGAATATTTTGTCATCACCGAGTAC 6402
|||||||| ||| | || ||| ||| || | || || |||||||| || |||||
Sbjct 52022 GGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTAT 52081
Query 6403 TTAATAAAGACTCATTATGTACCATTATTCAAAGGACTCACAATGGCGGATGATCTGACA 6462
|| || |||| |||| ||| || | | | |||| | |||||||| || || ||
Sbjct 52082 TTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAAC 52141
Query 6463 TCAGTTGTAAAGAAGATGTTGGACAACACGAATGGACA-AGGACTGGATGATTATTCATC 6521
| || || || |||||| || | | |||||| | ||| | |||| ||
Sbjct 52142 ACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCACAG-TTATG-AT- 52198
Query 6522 GATTTG--CATCGCCAATCACATCGACTATGAGAAGTGGAATAATCATCAGAGAAAAGAA 6579
|| || ||| || ||||| | || |||||||||||||| ||| |||| ||| ||
Sbjct 52199 GAGGTGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAG 52258
Query 6580 TCCAATGGGCCTGTGTTTCGAGTCATGGGGC-AGTTTTTGGGTTATCCCAGATTGTTTGA 6638
|||| || || || ||||||||| | | ||||||| ||| || | ||||||
Sbjct 52259 GGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTA-CCTAATTTGTTTAC 52317
Query 6639 AAGAACCCATGAGTTTTTT---GAATCAAGCCTCATTTACTACAACGGCAGACCAGACTT 6695
||||| ||||| || ||| || ||| || | || ||||| | ||||||| ||
Sbjct 52318 GAGAACACATGAATTCTTTCGGGATTCA---TTCTTCTATTACAAAGATCGACCAGATTT 52374
Query 6696 GATGGATGTAAGAGGAGATTCGTTGATCAATACCA---CTGAAAAGTTGGTGTGTTGGGA 6752
|||| | || |||||| || |||| || || | | |||| || |||||| |
Sbjct 52375 AATGGTTATAGAAGGAGA-CAGT--ATCACTAACAGCCCAGGGGAGTTTGTCTGTTGGCA 52431
Query 6753 GGGTCAGGCGGGAGGATTGGAAGGATTGAGACAAAAAGGATGGAGTGTG 6801
|| || || || || | ||||| || | || ||||| |||||| ||
Sbjct 52432 AGGCCAAGCCGGTGGTTGCGAAGGCTTACGTCAGAAAGGTTGGAGTCTG 52480
>seq9517
Length=2557
Score = 91.5 bits (100), Expect = 1e-14
Identities = 312/471 (66%), Gaps = 24/471 (5%)
Strand=Plus/Plus
Query 6343 GGAAGATTCTTTTCCCTGATGTCCTGGCAACTGAGAGAATATTTTGTCATCACCGAGTAC 6402
|||||||| ||| | || ||| ||| || | || || |||||||| || |||||
Sbjct 603 GGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTAT 662
Query 6403 TTAATAAAGACTCATTATGTACCATTATTCAAAGGACTCACAATGGCGGATGATCTGACA 6462
|| || |||| |||| ||| || | | | |||| | |||||||| || || || |||
Sbjct 663 TTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGA-CT-ACA 720
Query 6463 TCA--GTTGTAAAGAAGATGTTGGACAACACGAATGGACA-AGGACTG-GA-TGATTATT 6517
|| || || || |||||| || | | |||||| | ||| || | || ||
Sbjct 721 ACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATG 780
Query 6518 CATCGATTTGCATCGCCAATCACATCGACTATGAGAAGTGGAATAATCATCAGAGAAAAG 6577
||| ||| || ||||| | || |||||||||||||| ||| |||| ||| |
Sbjct 781 AGGCGAC---CATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTG 837
Query 6578 AATCCAATGGGCCTGTGTTTCGAGTCATGGGGC-AGTTTTTGGGTTATCCCAGATTGTTT 6636
| |||| || || || ||||||||| | | ||||||| ||| || | ||||||
Sbjct 838 AGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTA-CCTAATTTGTTT 896
Query 6637 GAAAGAACCCATGAGTTTTTT---GAATCAAGCCTCATTTACTACAACGGCAGACCAGAC 6693
||||| ||||| || ||| || ||| || | || ||||| | |||||||
Sbjct 897 ACGAGAACACATGAATTCTTTCGGGATTCA---TTCTTCTATTACAAAGATCGACCAGAT 953
Query 6694 TTGATGGATGTAAGAGGAGATTCGTTGATCAATACCA---CTGAAAAGTTGGTGTGTTGG 6750
|| || | | || |||||| || |||| || || | | |||| || ||||||
Sbjct 954 TTAATAGTTATAGAAGGAGA-CAGT--ATCACTAACAGCCCAGGGGAGTTTGTCTGTTGG 1010
Query 6751 GAGGGTCAGGCGGGAGGATTGGAAGGATTGAGACAAAAAGGATGGAGTGTG 6801
| || || || || || | ||||| || | || ||||| |||||| ||
Sbjct 1011 CAAGGCCAAGCCGGTGGTTGCGAAGGCTTACGTCAGAAAGGTTGGAGTCTG 1061
>seq8251
Length=2688
Score = 89.7 bits (98), Expect = 4e-14
Identities = 308/469 (66%), Gaps = 20/469 (4%)
Strand=Plus/Plus
Query 6343 GGAAGATTCTTTTCCCTGATGTCCTGGCAACTGAGAGAATATTTTGTCATCACCGAGTAC 6402
|||||||| ||| | || ||| ||| || | || || |||||||| || |||||
Sbjct 278 GGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTAT 337
Query 6403 TTAATAAAGACTCATTATGTACCATTATTCAAAGGACTCACAATGGCGGATGATCTGACA 6462
|| || |||| |||| ||| || | | | |||| | |||||||| || || ||
Sbjct 338 TTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAAC 397
Query 6463 TCAGTTGTAAAGAAGATGTTGGACAACACGAATGGACA-AGGACTG-GA-TGATTATTCA 6519
| || || || |||||| || | | |||||| | ||| || | || ||
Sbjct 398 ACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAG 457
Query 6520 TCGATTTGCATCGCCAATCACATCGACTATGAGAAGTGGAATAATCATCAGAGAAAAGAA 6579
||| ||| || ||||| | || |||||||||||||| ||| |||| ||| ||
Sbjct 458 GCGAC---CATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAG 514
Query 6580 TCCAATGGGCCTGTGTTTCGAGTCATGGGGC-AGTTTTTGGGTTATCCCAGATTGTTTGA 6638
|||| || || || ||||||||| | | ||||||| ||| || | ||||||
Sbjct 515 GGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTA-CCTAATTTGTTTAC 573
Query 6639 AAGAACCCATGAGTTTTTT---GAATCAAGCCTCATTTACTACAACGGCAGACCAGACTT 6695
||||| ||||| || ||| || ||| || | || ||||| | ||||||| ||
Sbjct 574 GAGAACACATGAATTCTTTCGGGATTCA---TTCTTCTATTACAAAGATCGACCAGATTT 630
Query 6696 GATGGATGTAAGAGGAGATTCGTTGATCAATACCA---CTGAAAAGTTGGTGTGTTGGGA 6752
|| | | || |||||| || |||| || || | | |||| || |||||| |
Sbjct 631 AATAGTTATAGAAGGAGA-CAGT--ATCACTAACAGCCCAGGGGAGTTTGTCTGTTGGCA 687
Query 6753 GGGTCAGGCGGGAGGATTGGAAGGATTGAGACAAAAAGGATGGAGTGTG 6801
|| || || || || | ||||| || | || ||||| |||||| ||
Sbjct 688 AGGCCAAGCCGGTGGTTGCGAAGGCTTACGTCAGAAAGGTTGGAGTCTG 736
>seq1814
Length=63972
Score = 89.7 bits (98), Expect = 4e-14
Identities = 308/469 (66%), Gaps = 20/469 (4%)
Strand=Plus/Plus
Query 6343 GGAAGATTCTTTTCCCTGATGTCCTGGCAACTGAGAGAATATTTTGTCATCACCGAGTAC 6402
|||||||| ||| | || ||| ||| || | || || |||||||| || |||||
Sbjct 1684 GGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTAT 1743
Query 6403 TTAATAAAGACTCATTATGTACCATTATTCAAAGGACTCACAATGGCGGATGATCTGACA 6462
|| || |||| |||| ||| || | | | |||| | |||||||| || || ||
Sbjct 1744 TTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAAC 1803
Query 6463 TCAGTTGTAAAGAAGATGTTGGACAACACGAATGGACA-AGGACTG-GA-TGATTATTCA 6519
| || || || |||||| || | | |||||| | ||| || | || ||
Sbjct 1804 ACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAG 1863
Query 6520 TCGATTTGCATCGCCAATCACATCGACTATGAGAAGTGGAATAATCATCAGAGAAAAGAA 6579
||| ||| || ||||| | || |||||||||||||| ||| |||| ||| ||
Sbjct 1864 GCGAC---CATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAG 1920
Query 6580 TCCAATGGGCCTGTGTTTCGAGTCATGGGGC-AGTTTTTGGGTTATCCCAGATTGTTTGA 6638
|||| || || || ||||||||| | | ||||||| ||| || | ||||||
Sbjct 1921 GGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTA-CCTAATTTGTTTAC 1979
Query 6639 AAGAACCCATGAGTTTTTT---GAATCAAGCCTCATTTACTACAACGGCAGACCAGACTT 6695
||||| ||||| || ||| || ||| || | || ||||| | ||||||| ||
Sbjct 1980 GAGAACACATGAATTCTTTCGGGATTCA---TTCTTCTATTACAAAGATCGACCAGATTT 2036
Query 6696 GATGGATGTAAGAGGAGATTCGTTGATCAATACCA---CTGAAAAGTTGGTGTGTTGGGA 6752
|| | | || |||||| || |||| || || | | |||| || |||||| |
Sbjct 2037 AATAGTTATAGAAGGAGA-CAGT--ATCACTAACAGCCCAGGGGAGTTTGTCTGTTGGCA 2093
Query 6753 GGGTCAGGCGGGAGGATTGGAAGGATTGAGACAAAAAGGATGGAGTGTG 6801
|| || || || || | ||||| || | || ||||| |||||| ||
Sbjct 2094 AGGCCAAGCCGGTGGTTGCGAAGGCTTACGTCAGAAAGGTTGGAGTCTG 2142
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35375055264360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |