Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_025358.1 Length=15024 Score E Sequences producing significant alignments: (Bits) Value seq1440 131 2e-26 seq8251 127 2e-25 seq1814 127 2e-25 seq9517 122 8e-24 seq2296 78.8 9e-11 >seq1440 Length=90230 Score = 131 bits (144), Expect = 2e-26 Identities = 265/390 (68%), Gaps = 5/390 (1%) Strand=Plus/Plus Query 10116 ATTAATGATCACGGACTAGATTGGGAAAAATTGGTGATTGGGTTGAAAGCTAAGGAACGA 10175 || || || || |||||| || | |||| ||||| || ||| ||| || ||| Sbjct 51950 ATAAACGACCAGGGACTATCCAGGAATGAATTAGTGATCGGTCTGAGAGCAAAAGAA--- 52006 Query 10176 GAACTTAAAGAAGAAGGTAGATTCTTTTCTTTAATGTCTTACGAATTGAGGGATTATTTT 10235 || || ||| | |||| ||||| ||| || | ||| || | | ||||| ||| Sbjct 52007 GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTT 52066 Query 10236 GTATCTACTGAATACCTGATCAAGAAATATTTTGTACCCTTATTTGAAGGTCTAACAATG 10295 || || || || |||| ||||| ||||||| || | | | ||| |||||||| Sbjct 52067 GTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATG 52126 Query 10296 GCTGATGATTTGAATACAGTAATTAAGAAGATGTTGGATGTCTCAAGCGGCCAGGGAAC- 10354 ||||| || | ||| || ||| | || |||||| || | | ||| || ||| || Sbjct 52127 GCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACT 52186 Query 10355 CAGAGAATATGATTATATAACTATTGCAAACAACATCGATTATGAAAAATGGAATAATTA 10414 || || |||||| | | || || ||||| | | |||||||| || ||||| ||||| Sbjct 52187 CACAGT-TATGATGAGGTGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTA 52245 Query 10415 TCAAAGGATAGAGTCTAACGGTCCAGTATTTACTGTCATGGGAAAATTTTTGGGGCTACC 10474 |||||| ||| || | ||| || || | |||||||| |||||| || |||| Sbjct 52246 TCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACC 52305 Query 10475 TAATCTCTTTACAAGAACTCATGAATTCTT 10504 |||| | ||||| ||||| ||||||||||| Sbjct 52306 TAATTTGTTTACGAGAACACATGAATTCTT 52335 >seq8251 Length=2688 Score = 127 bits (140), Expect = 2e-25 Identities = 246/360 (68%), Gaps = 5/360 (1%) Strand=Plus/Plus Query 10146 TTGGTGATTGGGTTGAAAGCTAAGGAACGAGAACTTAAAGAAGAAGGTAGATTCTTTTCT 10205 || ||||| || ||| ||| || ||| || || ||| | |||| ||||| ||| || Sbjct 236 TTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCT 292 Query 10206 TTAATGTCTTACGAATTGAGGGATTATTTTGTATCTACTGAATACCTGATCAAGAAATAT 10265 | ||| || | | ||||| ||||| || || || |||| ||||| || Sbjct 293 CTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCAT 352 Query 10266 TTTGTACCCTTATTTGAAGGTCTAACAATGGCTGATGATTTGAATACAGTAATTAAGAAG 10325 ||||| || | | | ||| ||||||||||||| || | ||| || ||| | || ||| Sbjct 353 TTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAG 412 Query 10326 ATGTTGGATGTCTCAAGCGGCCAGGGAAC-CAGAGAATATGATTATATAACTATTGCAAA 10384 ||| || | | ||| || ||| || ||||| |||||| | || || ||||| Sbjct 413 ATGATGCAAGCTTCATCTGGACAGACCACTCAGAGT-TATGATGAGGCGACCATAGCAAA 471 Query 10385 CAACATCGATTATGAAAAATGGAATAATTATCAAAGGATAGAGTCTAACGGTCCAGTATT 10444 | | |||||||| || ||||| ||||||||||| ||| || | ||| || || Sbjct 472 TCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTT 531 Query 10445 TACTGTCATGGGAAAATTTTTGGGGCTACCTAATCTCTTTACAAGAACTCATGAATTCTT 10504 | |||||||| |||||| || |||||||| | ||||| ||||| ||||||||||| Sbjct 532 CTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTT 591 >seq1814 Length=63972 Score = 127 bits (140), Expect = 2e-25 Identities = 246/360 (68%), Gaps = 5/360 (1%) Strand=Plus/Plus Query 10146 TTGGTGATTGGGTTGAAAGCTAAGGAACGAGAACTTAAAGAAGAAGGTAGATTCTTTTCT 10205 || ||||| || ||| ||| || ||| || || ||| | |||| ||||| ||| || Sbjct 1642 TTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCT 1698 Query 10206 TTAATGTCTTACGAATTGAGGGATTATTTTGTATCTACTGAATACCTGATCAAGAAATAT 10265 | ||| || | | ||||| ||||| || || || |||| ||||| || Sbjct 1699 CTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCAT 1758 Query 10266 TTTGTACCCTTATTTGAAGGTCTAACAATGGCTGATGATTTGAATACAGTAATTAAGAAG 10325 ||||| || | | | ||| ||||||||||||| || | ||| || ||| | || ||| Sbjct 1759 TTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAG 1818 Query 10326 ATGTTGGATGTCTCAAGCGGCCAGGGAAC-CAGAGAATATGATTATATAACTATTGCAAA 10384 ||| || | | ||| || ||| || ||||| |||||| | || || ||||| Sbjct 1819 ATGATGCAAGCTTCATCTGGACAGACCACTCAGAGT-TATGATGAGGCGACCATAGCAAA 1877 Query 10385 CAACATCGATTATGAAAAATGGAATAATTATCAAAGGATAGAGTCTAACGGTCCAGTATT 10444 | | |||||||| || ||||| ||||||||||| ||| || | ||| || || Sbjct 1878 TCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTT 1937 Query 10445 TACTGTCATGGGAAAATTTTTGGGGCTACCTAATCTCTTTACAAGAACTCATGAATTCTT 10504 | |||||||| |||||| || |||||||| | ||||| ||||| ||||||||||| Sbjct 1938 CTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTT 1997 >seq9517 Length=2557 Score = 122 bits (134), Expect = 8e-24 Identities = 245/360 (68%), Gaps = 5/360 (1%) Strand=Plus/Plus Query 10146 TTGGTGATTGGGTTGAAAGCTAAGGAACGAGAACTTAAAGAAGAAGGTAGATTCTTTTCT 10205 || ||||| || ||| ||| || ||| || || ||| | |||| ||||| ||| || Sbjct 561 TTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCT 617 Query 10206 TTAATGTCTTACGAATTGAGGGATTATTTTGTATCTACTGAATACCTGATCAAGAAATAT 10265 | ||| || | | ||||| ||||| || || || |||| ||||| || Sbjct 618 CTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCAT 677 Query 10266 TTTGTACCCTTATTTGAAGGTCTAACAATGGCTGATGATTTGAATACAGTAATTAAGAAG 10325 ||||| || | | | ||| ||||||||||||| || | || || ||| | || ||| Sbjct 678 TTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCAACAAG 737 Query 10326 ATGTTGGATGTCTCAAGCGGCCAGGGAAC-CAGAGAATATGATTATATAACTATTGCAAA 10384 ||| || | | ||| || ||| || ||||| |||||| | || || ||||| Sbjct 738 ATGATGCAAGCTTCATCTGGACAGACCACTCAGAGT-TATGATGAGGCGACCATAGCAAA 796 Query 10385 CAACATCGATTATGAAAAATGGAATAATTATCAAAGGATAGAGTCTAACGGTCCAGTATT 10444 | | |||||||| || ||||| ||||||||||| ||| || | ||| || || Sbjct 797 TCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTT 856 Query 10445 TACTGTCATGGGAAAATTTTTGGGGCTACCTAATCTCTTTACAAGAACTCATGAATTCTT 10504 | |||||||| |||||| || |||||||| | ||||| ||||| ||||||||||| Sbjct 857 CTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTT 916 >seq2296 Length=40579 Score = 78.8 bits (86), Expect = 9e-11 Identities = 185/276 (67%), Gaps = 5/276 (2%) Strand=Plus/Plus Query 10146 TTGGTGATTGGGTTGAAAGCTAAGGAACGAGAACTTAAAGAAGAAGGTAGATTCTTTTCT 10205 || ||||| || ||| ||| || ||| || || ||| | |||| ||||| ||| || Sbjct 1705 TTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCT 1761 Query 10206 TTAATGTCTTACGAATTGAGGGATTATTTTGTATCTACTGAATACCTGATCAAGAAATAT 10265 | ||| || | | ||||| ||||| || || || |||| ||||| || Sbjct 1762 CTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCAT 1821 Query 10266 TTTGTACCCTTATTTGAAGGTCTAACAATGGCTGATGATTTGAATACAGTAATTAAGAAG 10325 ||||| || | | | ||| ||||||||||||| || | || || ||| | || ||| Sbjct 1822 TTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCAACAAG 1881 Query 10326 ATGTTGGATGTCTCAAGCGGCCAGGGAAC-CAGAGAATATGATTATATAACTATTGCAAA 10384 ||| || | | ||| || ||| || ||||| |||||| | || || ||||| Sbjct 1882 ATGATGCAAGCTTCATCTGGACAGACCACTCAGAG-TTATGATGAGGCGACCATAGCAAA 1940 Query 10385 CAACATCGATTATGAAAAATGGAATAATTATCAAAG 10420 | | |||||||| || ||||| ||||||||||| Sbjct 1941 TCATGTTGATTATGAGAAGTGGAACAATTATCAAAG 1976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47930346883790