Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_025358.1
Length=15024
Score E
Sequences producing significant alignments: (Bits) Value
seq1440 131 2e-26
seq8251 127 2e-25
seq1814 127 2e-25
seq9517 122 8e-24
seq2296 78.8 9e-11
>seq1440
Length=90230
Score = 131 bits (144), Expect = 2e-26
Identities = 265/390 (68%), Gaps = 5/390 (1%)
Strand=Plus/Plus
Query 10116 ATTAATGATCACGGACTAGATTGGGAAAAATTGGTGATTGGGTTGAAAGCTAAGGAACGA 10175
|| || || || |||||| || | |||| ||||| || ||| ||| || |||
Sbjct 51950 ATAAACGACCAGGGACTATCCAGGAATGAATTAGTGATCGGTCTGAGAGCAAAAGAA--- 52006
Query 10176 GAACTTAAAGAAGAAGGTAGATTCTTTTCTTTAATGTCTTACGAATTGAGGGATTATTTT 10235
|| || ||| | |||| ||||| ||| || | ||| || | | ||||| |||
Sbjct 52007 GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTT 52066
Query 10236 GTATCTACTGAATACCTGATCAAGAAATATTTTGTACCCTTATTTGAAGGTCTAACAATG 10295
|| || || || |||| ||||| ||||||| || | | | ||| ||||||||
Sbjct 52067 GTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATG 52126
Query 10296 GCTGATGATTTGAATACAGTAATTAAGAAGATGTTGGATGTCTCAAGCGGCCAGGGAAC- 10354
||||| || | ||| || ||| | || |||||| || | | ||| || ||| ||
Sbjct 52127 GCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACT 52186
Query 10355 CAGAGAATATGATTATATAACTATTGCAAACAACATCGATTATGAAAAATGGAATAATTA 10414
|| || |||||| | | || || ||||| | | |||||||| || ||||| |||||
Sbjct 52187 CACAGT-TATGATGAGGTGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTA 52245
Query 10415 TCAAAGGATAGAGTCTAACGGTCCAGTATTTACTGTCATGGGAAAATTTTTGGGGCTACC 10474
|||||| ||| || | ||| || || | |||||||| |||||| || ||||
Sbjct 52246 TCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACC 52305
Query 10475 TAATCTCTTTACAAGAACTCATGAATTCTT 10504
|||| | ||||| ||||| |||||||||||
Sbjct 52306 TAATTTGTTTACGAGAACACATGAATTCTT 52335
>seq8251
Length=2688
Score = 127 bits (140), Expect = 2e-25
Identities = 246/360 (68%), Gaps = 5/360 (1%)
Strand=Plus/Plus
Query 10146 TTGGTGATTGGGTTGAAAGCTAAGGAACGAGAACTTAAAGAAGAAGGTAGATTCTTTTCT 10205
|| ||||| || ||| ||| || ||| || || ||| | |||| ||||| ||| ||
Sbjct 236 TTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCT 292
Query 10206 TTAATGTCTTACGAATTGAGGGATTATTTTGTATCTACTGAATACCTGATCAAGAAATAT 10265
| ||| || | | ||||| ||||| || || || |||| ||||| ||
Sbjct 293 CTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCAT 352
Query 10266 TTTGTACCCTTATTTGAAGGTCTAACAATGGCTGATGATTTGAATACAGTAATTAAGAAG 10325
||||| || | | | ||| ||||||||||||| || | ||| || ||| | || |||
Sbjct 353 TTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAG 412
Query 10326 ATGTTGGATGTCTCAAGCGGCCAGGGAAC-CAGAGAATATGATTATATAACTATTGCAAA 10384
||| || | | ||| || ||| || ||||| |||||| | || || |||||
Sbjct 413 ATGATGCAAGCTTCATCTGGACAGACCACTCAGAGT-TATGATGAGGCGACCATAGCAAA 471
Query 10385 CAACATCGATTATGAAAAATGGAATAATTATCAAAGGATAGAGTCTAACGGTCCAGTATT 10444
| | |||||||| || ||||| ||||||||||| ||| || | ||| || ||
Sbjct 472 TCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTT 531
Query 10445 TACTGTCATGGGAAAATTTTTGGGGCTACCTAATCTCTTTACAAGAACTCATGAATTCTT 10504
| |||||||| |||||| || |||||||| | ||||| ||||| |||||||||||
Sbjct 532 CTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTT 591
>seq1814
Length=63972
Score = 127 bits (140), Expect = 2e-25
Identities = 246/360 (68%), Gaps = 5/360 (1%)
Strand=Plus/Plus
Query 10146 TTGGTGATTGGGTTGAAAGCTAAGGAACGAGAACTTAAAGAAGAAGGTAGATTCTTTTCT 10205
|| ||||| || ||| ||| || ||| || || ||| | |||| ||||| ||| ||
Sbjct 1642 TTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCT 1698
Query 10206 TTAATGTCTTACGAATTGAGGGATTATTTTGTATCTACTGAATACCTGATCAAGAAATAT 10265
| ||| || | | ||||| ||||| || || || |||| ||||| ||
Sbjct 1699 CTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCAT 1758
Query 10266 TTTGTACCCTTATTTGAAGGTCTAACAATGGCTGATGATTTGAATACAGTAATTAAGAAG 10325
||||| || | | | ||| ||||||||||||| || | ||| || ||| | || |||
Sbjct 1759 TTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAG 1818
Query 10326 ATGTTGGATGTCTCAAGCGGCCAGGGAAC-CAGAGAATATGATTATATAACTATTGCAAA 10384
||| || | | ||| || ||| || ||||| |||||| | || || |||||
Sbjct 1819 ATGATGCAAGCTTCATCTGGACAGACCACTCAGAGT-TATGATGAGGCGACCATAGCAAA 1877
Query 10385 CAACATCGATTATGAAAAATGGAATAATTATCAAAGGATAGAGTCTAACGGTCCAGTATT 10444
| | |||||||| || ||||| ||||||||||| ||| || | ||| || ||
Sbjct 1878 TCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTT 1937
Query 10445 TACTGTCATGGGAAAATTTTTGGGGCTACCTAATCTCTTTACAAGAACTCATGAATTCTT 10504
| |||||||| |||||| || |||||||| | ||||| ||||| |||||||||||
Sbjct 1938 CTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTT 1997
>seq9517
Length=2557
Score = 122 bits (134), Expect = 8e-24
Identities = 245/360 (68%), Gaps = 5/360 (1%)
Strand=Plus/Plus
Query 10146 TTGGTGATTGGGTTGAAAGCTAAGGAACGAGAACTTAAAGAAGAAGGTAGATTCTTTTCT 10205
|| ||||| || ||| ||| || ||| || || ||| | |||| ||||| ||| ||
Sbjct 561 TTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCT 617
Query 10206 TTAATGTCTTACGAATTGAGGGATTATTTTGTATCTACTGAATACCTGATCAAGAAATAT 10265
| ||| || | | ||||| ||||| || || || |||| ||||| ||
Sbjct 618 CTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCAT 677
Query 10266 TTTGTACCCTTATTTGAAGGTCTAACAATGGCTGATGATTTGAATACAGTAATTAAGAAG 10325
||||| || | | | ||| ||||||||||||| || | || || ||| | || |||
Sbjct 678 TTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCAACAAG 737
Query 10326 ATGTTGGATGTCTCAAGCGGCCAGGGAAC-CAGAGAATATGATTATATAACTATTGCAAA 10384
||| || | | ||| || ||| || ||||| |||||| | || || |||||
Sbjct 738 ATGATGCAAGCTTCATCTGGACAGACCACTCAGAGT-TATGATGAGGCGACCATAGCAAA 796
Query 10385 CAACATCGATTATGAAAAATGGAATAATTATCAAAGGATAGAGTCTAACGGTCCAGTATT 10444
| | |||||||| || ||||| ||||||||||| ||| || | ||| || ||
Sbjct 797 TCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTT 856
Query 10445 TACTGTCATGGGAAAATTTTTGGGGCTACCTAATCTCTTTACAAGAACTCATGAATTCTT 10504
| |||||||| |||||| || |||||||| | ||||| ||||| |||||||||||
Sbjct 857 CTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTT 916
>seq2296
Length=40579
Score = 78.8 bits (86), Expect = 9e-11
Identities = 185/276 (67%), Gaps = 5/276 (2%)
Strand=Plus/Plus
Query 10146 TTGGTGATTGGGTTGAAAGCTAAGGAACGAGAACTTAAAGAAGAAGGTAGATTCTTTTCT 10205
|| ||||| || ||| ||| || ||| || || ||| | |||| ||||| ||| ||
Sbjct 1705 TTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCT 1761
Query 10206 TTAATGTCTTACGAATTGAGGGATTATTTTGTATCTACTGAATACCTGATCAAGAAATAT 10265
| ||| || | | ||||| ||||| || || || |||| ||||| ||
Sbjct 1762 CTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCAT 1821
Query 10266 TTTGTACCCTTATTTGAAGGTCTAACAATGGCTGATGATTTGAATACAGTAATTAAGAAG 10325
||||| || | | | ||| ||||||||||||| || | || || ||| | || |||
Sbjct 1822 TTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCAACAAG 1881
Query 10326 ATGTTGGATGTCTCAAGCGGCCAGGGAAC-CAGAGAATATGATTATATAACTATTGCAAA 10384
||| || | | ||| || ||| || ||||| |||||| | || || |||||
Sbjct 1882 ATGATGCAAGCTTCATCTGGACAGACCACTCAGAG-TTATGATGAGGCGACCATAGCAAA 1940
Query 10385 CAACATCGATTATGAAAAATGGAATAATTATCAAAG 10420
| | |||||||| || ||||| |||||||||||
Sbjct 1941 TCATGTTGATTATGAGAAGTGGAACAATTATCAAAG 1976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 47930346883790
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |