Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_025362.1 Length=12240 Score E Sequences producing significant alignments: (Bits) Value seq1440 152 4e-33 seq8251 145 6e-31 seq1814 145 6e-31 seq9517 141 7e-30 seq2296 116 3e-22 >seq1440 Length=90230 Score = 152 bits (168), Expect = 4e-33 Identities = 253/365 (69%), Gaps = 3/365 (1%) Strand=Plus/Plus Query 7429 ATGCATTGATTATTGGTTTGAAAGCAAAAGAAAGAGAAATGAAACGAGTAGGAAGAtttt 7488 ||| ||| | || ||| ||| |||||||||| || |||||| | ||||||||||| Sbjct 51975 ATGAATTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTT 52031 Query 7489 tttCACTTATGTCTTGGGAACTGAGGGAGTATTTTGTATCTACTGAATACTTGATTAAGA 7548 || | || ||| |||| || | || || ||||| || || || |||||||||| Sbjct 52032 TTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGA 52091 Query 7549 AGCATTTTGTACCATTGTTTAAAGGCTTGACTATGGCTGATGGATTGATGACGGTAACTA 7608 |||||||||| || | | || ||| || || |||||||| | | || || ||| | Sbjct 52092 AGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCA 52151 Query 7609 AGAAAATGTTGGAGTCATCAATGGGACAGGGGAATCCTGATTATGAGACTGTGTCCATTG 7668 | || ||| || | | ||| |||||| | || |||||| ||| |||| | Sbjct 52152 ACAAGATGATGCAAGCTTCATCTGGACAGACCACTCACAGTTATGATGAGGTGACCATAG 52211 Query 7669 CTAACCATGTCGATTATGAGAAGTGGAACAACCACCAAAGAAGATTGTCAAATCAGGCAG 7728 | || ||||| |||||||||||||||||||| | |||||| | | |||| | | | Sbjct 52212 CAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGG 52271 Query 7729 TCTTTAGAGTCATGGGACAATTTTTAGGTTACCCAAATTTGATAAGTCGCACCCATGAAT 7788 |||| ||||||||| | |||||| || | || |||||| | | | || ||||||| Sbjct 52272 TCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAAT 52331 Query 7789 TTTTT 7793 | ||| Sbjct 52332 TCTTT 52336 >seq8251 Length=2688 Score = 145 bits (160), Expect = 6e-31 Identities = 245/354 (69%), Gaps = 3/354 (1%) Strand=Plus/Plus Query 7440 ATTGGTTTGAAAGCAAAAGAAAGAGAAATGAAACGAGTAGGAAGAtttttttCACTTATG 7499 || ||| ||| |||||||||| || |||||| | ||||||||||||| | || ||| Sbjct 242 ATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATG 298 Query 7500 TCTTGGGAACTGAGGGAGTATTTTGTATCTACTGAATACTTGATTAAGAAGCATTTTGTA 7559 |||| || | || || ||||| || || || |||||||||||||||||||| Sbjct 299 AGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTT 358 Query 7560 CCATTGTTTAAAGGCTTGACTATGGCTGATGGATTGATGACGGTAACTAAGAAAATGTTG 7619 || | | || ||| || || |||||||| | | || || ||| || || ||| || Sbjct 359 CCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATG 418 Query 7620 GAGTCATCAATGGGACAGGGGAATCCTGATTATGAGACTGTGTCCATTGCTAACCATGTC 7679 | | ||| |||||| | || |||||| | | |||| || || ||||| Sbjct 419 CAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTT 478 Query 7680 GATTATGAGAAGTGGAACAACCACCAAAGAAGATTGTCAAATCAGGCAGTCTTTAGAGTC 7739 |||||||||||||||||||| | |||||| | | |||| | | ||||| |||| Sbjct 479 GATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTC 538 Query 7740 ATGGGACAATTTTTAGGTTACCCAAATTTGATAAGTCGCACCCATGAATTTTTT 7793 ||||| | |||||| || | || |||||| | | | || |||||||| ||| Sbjct 539 ATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 592 >seq1814 Length=63972 Score = 145 bits (160), Expect = 6e-31 Identities = 245/354 (69%), Gaps = 3/354 (1%) Strand=Plus/Plus Query 7440 ATTGGTTTGAAAGCAAAAGAAAGAGAAATGAAACGAGTAGGAAGAtttttttCACTTATG 7499 || ||| ||| |||||||||| || |||||| | ||||||||||||| | || ||| Sbjct 1648 ATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATG 1704 Query 7500 TCTTGGGAACTGAGGGAGTATTTTGTATCTACTGAATACTTGATTAAGAAGCATTTTGTA 7559 |||| || | || || ||||| || || || |||||||||||||||||||| Sbjct 1705 AGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTT 1764 Query 7560 CCATTGTTTAAAGGCTTGACTATGGCTGATGGATTGATGACGGTAACTAAGAAAATGTTG 7619 || | | || ||| || || |||||||| | | || || ||| || || ||| || Sbjct 1765 CCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATG 1824 Query 7620 GAGTCATCAATGGGACAGGGGAATCCTGATTATGAGACTGTGTCCATTGCTAACCATGTC 7679 | | ||| |||||| | || |||||| | | |||| || || ||||| Sbjct 1825 CAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTT 1884 Query 7680 GATTATGAGAAGTGGAACAACCACCAAAGAAGATTGTCAAATCAGGCAGTCTTTAGAGTC 7739 |||||||||||||||||||| | |||||| | | |||| | | ||||| |||| Sbjct 1885 GATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTC 1944 Query 7740 ATGGGACAATTTTTAGGTTACCCAAATTTGATAAGTCGCACCCATGAATTTTTT 7793 ||||| | |||||| || | || |||||| | | | || |||||||| ||| Sbjct 1945 ATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 1998 >seq9517 Length=2557 Score = 141 bits (156), Expect = 7e-30 Identities = 244/354 (69%), Gaps = 3/354 (1%) Strand=Plus/Plus Query 7440 ATTGGTTTGAAAGCAAAAGAAAGAGAAATGAAACGAGTAGGAAGAtttttttCACTTATG 7499 || ||| ||| |||||||||| || |||||| | ||||||||||||| | || ||| Sbjct 567 ATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATG 623 Query 7500 TCTTGGGAACTGAGGGAGTATTTTGTATCTACTGAATACTTGATTAAGAAGCATTTTGTA 7559 |||| || | || || ||||| || || || |||||||||||||||||||| Sbjct 624 AGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTT 683 Query 7560 CCATTGTTTAAAGGCTTGACTATGGCTGATGGATTGATGACGGTAACTAAGAAAATGTTG 7619 || | | || ||| || || |||||||| | | | || ||| || || ||| || Sbjct 684 CCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCAACAAGATGATG 743 Query 7620 GAGTCATCAATGGGACAGGGGAATCCTGATTATGAGACTGTGTCCATTGCTAACCATGTC 7679 | | ||| |||||| | || |||||| | | |||| || || ||||| Sbjct 744 CAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTT 803 Query 7680 GATTATGAGAAGTGGAACAACCACCAAAGAAGATTGTCAAATCAGGCAGTCTTTAGAGTC 7739 |||||||||||||||||||| | |||||| | | |||| | | ||||| |||| Sbjct 804 GATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTC 863 Query 7740 ATGGGACAATTTTTAGGTTACCCAAATTTGATAAGTCGCACCCATGAATTTTTT 7793 ||||| | |||||| || | || |||||| | | | || |||||||| ||| Sbjct 864 ATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 917 >seq2296 Length=40579 Score = 116 bits (128), Expect = 3e-22 Identities = 188/270 (70%), Gaps = 3/270 (1%) Strand=Plus/Plus Query 7440 ATTGGTTTGAAAGCAAAAGAAAGAGAAATGAAACGAGTAGGAAGAtttttttCACTTATG 7499 || ||| ||| |||||||||| || |||||| | ||||||||||||| | || ||| Sbjct 1711 ATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATG 1767 Query 7500 TCTTGGGAACTGAGGGAGTATTTTGTATCTACTGAATACTTGATTAAGAAGCATTTTGTA 7559 |||| || | || || ||||| || || || |||||||||||||||||||| Sbjct 1768 AGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTT 1827 Query 7560 CCATTGTTTAAAGGCTTGACTATGGCTGATGGATTGATGACGGTAACTAAGAAAATGTTG 7619 || | | || ||| || || |||||||| | | | || ||| || || ||| || Sbjct 1828 CCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCAACAAGATGATG 1887 Query 7620 GAGTCATCAATGGGACAGGGGAATCCTGATTATGAGACTGTGTCCATTGCTAACCATGTC 7679 | | ||| |||||| | || |||||| | | |||| || || ||||| Sbjct 1888 CAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTT 1947 Query 7680 GATTATGAGAAGTGGAACAACCACCAAAGA 7709 |||||||||||||||||||| | |||||| Sbjct 1948 GATTATGAGAAGTGGAACAATTATCAAAGA 1977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39030573587040