Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_025362.1
Length=12240
Score E
Sequences producing significant alignments: (Bits) Value
seq1440 152 4e-33
seq8251 145 6e-31
seq1814 145 6e-31
seq9517 141 7e-30
seq2296 116 3e-22
>seq1440
Length=90230
Score = 152 bits (168), Expect = 4e-33
Identities = 253/365 (69%), Gaps = 3/365 (1%)
Strand=Plus/Plus
Query 7429 ATGCATTGATTATTGGTTTGAAAGCAAAAGAAAGAGAAATGAAACGAGTAGGAAGAtttt 7488
||| ||| | || ||| ||| |||||||||| || |||||| | |||||||||||
Sbjct 51975 ATGAATTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTT 52031
Query 7489 tttCACTTATGTCTTGGGAACTGAGGGAGTATTTTGTATCTACTGAATACTTGATTAAGA 7548
|| | || ||| |||| || | || || ||||| || || || ||||||||||
Sbjct 52032 TTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGA 52091
Query 7549 AGCATTTTGTACCATTGTTTAAAGGCTTGACTATGGCTGATGGATTGATGACGGTAACTA 7608
|||||||||| || | | || ||| || || |||||||| | | || || ||| |
Sbjct 52092 AGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCA 52151
Query 7609 AGAAAATGTTGGAGTCATCAATGGGACAGGGGAATCCTGATTATGAGACTGTGTCCATTG 7668
| || ||| || | | ||| |||||| | || |||||| ||| |||| |
Sbjct 52152 ACAAGATGATGCAAGCTTCATCTGGACAGACCACTCACAGTTATGATGAGGTGACCATAG 52211
Query 7669 CTAACCATGTCGATTATGAGAAGTGGAACAACCACCAAAGAAGATTGTCAAATCAGGCAG 7728
| || ||||| |||||||||||||||||||| | |||||| | | |||| | | |
Sbjct 52212 CAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGG 52271
Query 7729 TCTTTAGAGTCATGGGACAATTTTTAGGTTACCCAAATTTGATAAGTCGCACCCATGAAT 7788
|||| ||||||||| | |||||| || | || |||||| | | | || |||||||
Sbjct 52272 TCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAAT 52331
Query 7789 TTTTT 7793
| |||
Sbjct 52332 TCTTT 52336
>seq8251
Length=2688
Score = 145 bits (160), Expect = 6e-31
Identities = 245/354 (69%), Gaps = 3/354 (1%)
Strand=Plus/Plus
Query 7440 ATTGGTTTGAAAGCAAAAGAAAGAGAAATGAAACGAGTAGGAAGAtttttttCACTTATG 7499
|| ||| ||| |||||||||| || |||||| | ||||||||||||| | || |||
Sbjct 242 ATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATG 298
Query 7500 TCTTGGGAACTGAGGGAGTATTTTGTATCTACTGAATACTTGATTAAGAAGCATTTTGTA 7559
|||| || | || || ||||| || || || ||||||||||||||||||||
Sbjct 299 AGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTT 358
Query 7560 CCATTGTTTAAAGGCTTGACTATGGCTGATGGATTGATGACGGTAACTAAGAAAATGTTG 7619
|| | | || ||| || || |||||||| | | || || ||| || || ||| ||
Sbjct 359 CCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATG 418
Query 7620 GAGTCATCAATGGGACAGGGGAATCCTGATTATGAGACTGTGTCCATTGCTAACCATGTC 7679
| | ||| |||||| | || |||||| | | |||| || || |||||
Sbjct 419 CAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTT 478
Query 7680 GATTATGAGAAGTGGAACAACCACCAAAGAAGATTGTCAAATCAGGCAGTCTTTAGAGTC 7739
|||||||||||||||||||| | |||||| | | |||| | | ||||| ||||
Sbjct 479 GATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTC 538
Query 7740 ATGGGACAATTTTTAGGTTACCCAAATTTGATAAGTCGCACCCATGAATTTTTT 7793
||||| | |||||| || | || |||||| | | | || |||||||| |||
Sbjct 539 ATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 592
>seq1814
Length=63972
Score = 145 bits (160), Expect = 6e-31
Identities = 245/354 (69%), Gaps = 3/354 (1%)
Strand=Plus/Plus
Query 7440 ATTGGTTTGAAAGCAAAAGAAAGAGAAATGAAACGAGTAGGAAGAtttttttCACTTATG 7499
|| ||| ||| |||||||||| || |||||| | ||||||||||||| | || |||
Sbjct 1648 ATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATG 1704
Query 7500 TCTTGGGAACTGAGGGAGTATTTTGTATCTACTGAATACTTGATTAAGAAGCATTTTGTA 7559
|||| || | || || ||||| || || || ||||||||||||||||||||
Sbjct 1705 AGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTT 1764
Query 7560 CCATTGTTTAAAGGCTTGACTATGGCTGATGGATTGATGACGGTAACTAAGAAAATGTTG 7619
|| | | || ||| || || |||||||| | | || || ||| || || ||| ||
Sbjct 1765 CCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATG 1824
Query 7620 GAGTCATCAATGGGACAGGGGAATCCTGATTATGAGACTGTGTCCATTGCTAACCATGTC 7679
| | ||| |||||| | || |||||| | | |||| || || |||||
Sbjct 1825 CAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTT 1884
Query 7680 GATTATGAGAAGTGGAACAACCACCAAAGAAGATTGTCAAATCAGGCAGTCTTTAGAGTC 7739
|||||||||||||||||||| | |||||| | | |||| | | ||||| ||||
Sbjct 1885 GATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTC 1944
Query 7740 ATGGGACAATTTTTAGGTTACCCAAATTTGATAAGTCGCACCCATGAATTTTTT 7793
||||| | |||||| || | || |||||| | | | || |||||||| |||
Sbjct 1945 ATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 1998
>seq9517
Length=2557
Score = 141 bits (156), Expect = 7e-30
Identities = 244/354 (69%), Gaps = 3/354 (1%)
Strand=Plus/Plus
Query 7440 ATTGGTTTGAAAGCAAAAGAAAGAGAAATGAAACGAGTAGGAAGAtttttttCACTTATG 7499
|| ||| ||| |||||||||| || |||||| | ||||||||||||| | || |||
Sbjct 567 ATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATG 623
Query 7500 TCTTGGGAACTGAGGGAGTATTTTGTATCTACTGAATACTTGATTAAGAAGCATTTTGTA 7559
|||| || | || || ||||| || || || ||||||||||||||||||||
Sbjct 624 AGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTT 683
Query 7560 CCATTGTTTAAAGGCTTGACTATGGCTGATGGATTGATGACGGTAACTAAGAAAATGTTG 7619
|| | | || ||| || || |||||||| | | | || ||| || || ||| ||
Sbjct 684 CCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCAACAAGATGATG 743
Query 7620 GAGTCATCAATGGGACAGGGGAATCCTGATTATGAGACTGTGTCCATTGCTAACCATGTC 7679
| | ||| |||||| | || |||||| | | |||| || || |||||
Sbjct 744 CAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTT 803
Query 7680 GATTATGAGAAGTGGAACAACCACCAAAGAAGATTGTCAAATCAGGCAGTCTTTAGAGTC 7739
|||||||||||||||||||| | |||||| | | |||| | | ||||| ||||
Sbjct 804 GATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTC 863
Query 7740 ATGGGACAATTTTTAGGTTACCCAAATTTGATAAGTCGCACCCATGAATTTTTT 7793
||||| | |||||| || | || |||||| | | | || |||||||| |||
Sbjct 864 ATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 917
>seq2296
Length=40579
Score = 116 bits (128), Expect = 3e-22
Identities = 188/270 (70%), Gaps = 3/270 (1%)
Strand=Plus/Plus
Query 7440 ATTGGTTTGAAAGCAAAAGAAAGAGAAATGAAACGAGTAGGAAGAtttttttCACTTATG 7499
|| ||| ||| |||||||||| || |||||| | ||||||||||||| | || |||
Sbjct 1711 ATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATG 1767
Query 7500 TCTTGGGAACTGAGGGAGTATTTTGTATCTACTGAATACTTGATTAAGAAGCATTTTGTA 7559
|||| || | || || ||||| || || || ||||||||||||||||||||
Sbjct 1768 AGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTT 1827
Query 7560 CCATTGTTTAAAGGCTTGACTATGGCTGATGGATTGATGACGGTAACTAAGAAAATGTTG 7619
|| | | || ||| || || |||||||| | | | || ||| || || ||| ||
Sbjct 1828 CCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCAACAAGATGATG 1887
Query 7620 GAGTCATCAATGGGACAGGGGAATCCTGATTATGAGACTGTGTCCATTGCTAACCATGTC 7679
| | ||| |||||| | || |||||| | | |||| || || |||||
Sbjct 1888 CAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTT 1947
Query 7680 GATTATGAGAAGTGGAACAACCACCAAAGA 7709
|||||||||||||||||||| | ||||||
Sbjct 1948 GATTATGAGAAGTGGAACAATTATCAAAGA 1977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 39030573587040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |