Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_025364.1 Length=11019 Score E Sequences producing significant alignments: (Bits) Value seq8251 114 9e-22 seq1814 114 9e-22 seq1440 114 9e-22 seq9517 111 1e-20 seq2296 89.7 4e-14 >seq8251 Length=2688 Score = 114 bits (126), Expect = 9e-22 Identities = 251/376 (67%), Gaps = 25/376 (7%) Strand=Plus/Plus Query 6166 ATGATTTAGTCATCGGCTTAAAAGGCAAGGAAAGAGAATTAAAAATAGCAGGTAGATTTT 6225 |||| ||||| ||||| | | || || ||| || | ||| || ||| ||||||| Sbjct 231 ATGAGTTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTT 287 Query 6226 TCTCTCTCATGTCTTGGAAATTGAGGGAATACTTTGTGATCACAGAGTACTTAATTAAGA 6285 | |||||||| |||| | | || |||||||| || || ||||| || ||||||| Sbjct 288 TTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGA 347 Query 6286 CACATTTTGTGCCTCTATTTCATGGTCTCACCATGGCTGACGACATGACTGCAGTCATCA 6345 |||||||| ||||| | | || | || |||||||||||| || | || ||| Sbjct 348 AGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCA 407 Query 6346 AAAAGATGTTGGAAAGCTCATCTGGACAAGGTTTGTTAGATTACTCAGCGGTATG----- 6400 | |||||| || || |||||||||| ||| |||||| | |||| Sbjct 408 ACAAGATGATGCAAGCTTCATCTGGAC----------AGACCACTCAGAGTTATGATGAG 457 Query 6401 -----CCTGGCCAACCATATAGATTATGAAAAATGGAACAATCACCAGCGAAAATTGTCA 6455 | | || || ||| | |||||||| || ||||||||| | || || | | Sbjct 458 GCGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGA 517 Query 6456 AACGGTCCTGTCTTCAAGGTCATGGGCCAATTCCTTGGGTTTCCGAATCTAATATAC-AG 6514 || | ||| |||||| |||||||| | ||| |||| || || ||| | | ||| || Sbjct 518 AATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAAT-TTGTTTACGAG 576 Query 6515 AACTCATGAATTTTTT 6530 ||| |||||||| ||| Sbjct 577 AACACATGAATTCTTT 592 >seq1814 Length=63972 Score = 114 bits (126), Expect = 9e-22 Identities = 251/376 (67%), Gaps = 25/376 (7%) Strand=Plus/Plus Query 6166 ATGATTTAGTCATCGGCTTAAAAGGCAAGGAAAGAGAATTAAAAATAGCAGGTAGATTTT 6225 |||| ||||| ||||| | | || || ||| || | ||| || ||| ||||||| Sbjct 1637 ATGAGTTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTT 1693 Query 6226 TCTCTCTCATGTCTTGGAAATTGAGGGAATACTTTGTGATCACAGAGTACTTAATTAAGA 6285 | |||||||| |||| | | || |||||||| || || ||||| || ||||||| Sbjct 1694 TTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGA 1753 Query 6286 CACATTTTGTGCCTCTATTTCATGGTCTCACCATGGCTGACGACATGACTGCAGTCATCA 6345 |||||||| ||||| | | || | || |||||||||||| || | || ||| Sbjct 1754 AGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCA 1813 Query 6346 AAAAGATGTTGGAAAGCTCATCTGGACAAGGTTTGTTAGATTACTCAGCGGTATG----- 6400 | |||||| || || |||||||||| ||| |||||| | |||| Sbjct 1814 ACAAGATGATGCAAGCTTCATCTGGAC----------AGACCACTCAGAGTTATGATGAG 1863 Query 6401 -----CCTGGCCAACCATATAGATTATGAAAAATGGAACAATCACCAGCGAAAATTGTCA 6455 | | || || ||| | |||||||| || ||||||||| | || || | | Sbjct 1864 GCGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGA 1923 Query 6456 AACGGTCCTGTCTTCAAGGTCATGGGCCAATTCCTTGGGTTTCCGAATCTAATATAC-AG 6514 || | ||| |||||| |||||||| | ||| |||| || || ||| | | ||| || Sbjct 1924 AATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAAT-TTGTTTACGAG 1982 Query 6515 AACTCATGAATTTTTT 6530 ||| |||||||| ||| Sbjct 1983 AACACATGAATTCTTT 1998 >seq1440 Length=90230 Score = 114 bits (126), Expect = 9e-22 Identities = 249/367 (68%), Gaps = 7/367 (2%) Strand=Plus/Plus Query 6166 ATGATTTAGTCATCGGCTTAAAAGGCAAGGAAAGAGAATTAAAAATAGCAGGTAGATTTT 6225 |||| ||||| ||||| | | || || ||| || | ||| || ||| ||||||| Sbjct 51975 ATGAATTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTT 52031 Query 6226 TCTCTCTCATGTCTTGGAAATTGAGGGAATACTTTGTGATCACAGAGTACTTAATTAAGA 6285 | |||||||| |||| | | || |||||||| || || ||||| || ||||||| Sbjct 52032 TTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGA 52091 Query 6286 CACATTTTGTGCCTCTATTTCATGGTCTCACCATGGCTGACGACATGACTGCAGTCATCA 6345 |||||||| ||||| | | || | || |||||||||||| || | || ||| Sbjct 52092 AGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCA 52151 Query 6346 AAAAGATGTTGGAAAGCTCATCTGGACA-AGGTTTGTTAGATTACTCAGCGGTATGCCTG 6404 | |||||| || || ||||||||||| | | || ||| | ||| | | Sbjct 52152 ACAAGATGATGCAAGCTTCATCTGGACAGACCACTCACAG-TTATGATGAGGTGACCATA 52210 Query 6405 GCCAACCATATAGATTATGAAAAATGGAACAATCACCAGCGAAAATTGTCAAACGGTCCT 6464 || || ||| | |||||||| || ||||||||| | || || | ||| | ||| Sbjct 52211 GCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCG 52270 Query 6465 GTCTTCAAGGTCATGGGCCAATTCCTTGGGTTTCCGAATCTAATATAC-AGAACTCATGA 6523 |||||| |||||||| | ||| |||| || || ||| | | ||| ||||| ||||| Sbjct 52271 GTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAAT-TTGTTTACGAGAACACATGA 52329 Query 6524 ATTTTTT 6530 ||| ||| Sbjct 52330 ATTCTTT 52336 >seq9517 Length=2557 Score = 111 bits (122), Expect = 1e-20 Identities = 250/376 (66%), Gaps = 25/376 (7%) Strand=Plus/Plus Query 6166 ATGATTTAGTCATCGGCTTAAAAGGCAAGGAAAGAGAATTAAAAATAGCAGGTAGATTTT 6225 |||| ||||| ||||| | | || || ||| || | ||| || ||| ||||||| Sbjct 556 ATGAGTTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTT 612 Query 6226 TCTCTCTCATGTCTTGGAAATTGAGGGAATACTTTGTGATCACAGAGTACTTAATTAAGA 6285 | |||||||| |||| | | || |||||||| || || ||||| || ||||||| Sbjct 613 TTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGA 672 Query 6286 CACATTTTGTGCCTCTATTTCATGGTCTCACCATGGCTGACGACATGACTGCAGTCATCA 6345 |||||||| ||||| | | || | || |||||||||||| | | || ||| Sbjct 673 AGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCA 732 Query 6346 AAAAGATGTTGGAAAGCTCATCTGGACAAGGTTTGTTAGATTACTCAGCGGTATG----- 6400 | |||||| || || |||||||||| ||| |||||| | |||| Sbjct 733 ACAAGATGATGCAAGCTTCATCTGGAC----------AGACCACTCAGAGTTATGATGAG 782 Query 6401 -----CCTGGCCAACCATATAGATTATGAAAAATGGAACAATCACCAGCGAAAATTGTCA 6455 | | || || ||| | |||||||| || ||||||||| | || || | | Sbjct 783 GCGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGA 842 Query 6456 AACGGTCCTGTCTTCAAGGTCATGGGCCAATTCCTTGGGTTTCCGAATCTAATATAC-AG 6514 || | ||| |||||| |||||||| | ||| |||| || || ||| | | ||| || Sbjct 843 AATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAAT-TTGTTTACGAG 901 Query 6515 AACTCATGAATTTTTT 6530 ||| |||||||| ||| Sbjct 902 AACACATGAATTCTTT 917 >seq2296 Length=40579 Score = 89.7 bits (98), Expect = 4e-14 Identities = 145/208 (70%), Gaps = 3/208 (1%) Strand=Plus/Plus Query 6166 ATGATTTAGTCATCGGCTTAAAAGGCAAGGAAAGAGAATTAAAAATAGCAGGTAGATTTT 6225 |||| ||||| ||||| | | || || ||| || | ||| || ||| ||||||| Sbjct 1700 ATGAGTTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTT 1756 Query 6226 TCTCTCTCATGTCTTGGAAATTGAGGGAATACTTTGTGATCACAGAGTACTTAATTAAGA 6285 | |||||||| |||| | | || |||||||| || || ||||| || ||||||| Sbjct 1757 TTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGA 1816 Query 6286 CACATTTTGTGCCTCTATTTCATGGTCTCACCATGGCTGACGACATGACTGCAGTCATCA 6345 |||||||| ||||| | | || | || |||||||||||| | | || ||| Sbjct 1817 AGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCA 1876 Query 6346 AAAAGATGTTGGAAAGCTCATCTGGACA 6373 | |||||| || || ||||||||||| Sbjct 1877 ACAAGATGATGCAAGCTTCATCTGGACA 1904 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35125597321080