Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_025364.1
Length=11019
Score E
Sequences producing significant alignments: (Bits) Value
seq8251 114 9e-22
seq1814 114 9e-22
seq1440 114 9e-22
seq9517 111 1e-20
seq2296 89.7 4e-14
>seq8251
Length=2688
Score = 114 bits (126), Expect = 9e-22
Identities = 251/376 (67%), Gaps = 25/376 (7%)
Strand=Plus/Plus
Query 6166 ATGATTTAGTCATCGGCTTAAAAGGCAAGGAAAGAGAATTAAAAATAGCAGGTAGATTTT 6225
|||| ||||| ||||| | | || || ||| || | ||| || ||| |||||||
Sbjct 231 ATGAGTTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTT 287
Query 6226 TCTCTCTCATGTCTTGGAAATTGAGGGAATACTTTGTGATCACAGAGTACTTAATTAAGA 6285
| |||||||| |||| | | || |||||||| || || ||||| || |||||||
Sbjct 288 TTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGA 347
Query 6286 CACATTTTGTGCCTCTATTTCATGGTCTCACCATGGCTGACGACATGACTGCAGTCATCA 6345
|||||||| ||||| | | || | || |||||||||||| || | || |||
Sbjct 348 AGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCA 407
Query 6346 AAAAGATGTTGGAAAGCTCATCTGGACAAGGTTTGTTAGATTACTCAGCGGTATG----- 6400
| |||||| || || |||||||||| ||| |||||| | ||||
Sbjct 408 ACAAGATGATGCAAGCTTCATCTGGAC----------AGACCACTCAGAGTTATGATGAG 457
Query 6401 -----CCTGGCCAACCATATAGATTATGAAAAATGGAACAATCACCAGCGAAAATTGTCA 6455
| | || || ||| | |||||||| || ||||||||| | || || | |
Sbjct 458 GCGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGA 517
Query 6456 AACGGTCCTGTCTTCAAGGTCATGGGCCAATTCCTTGGGTTTCCGAATCTAATATAC-AG 6514
|| | ||| |||||| |||||||| | ||| |||| || || ||| | | ||| ||
Sbjct 518 AATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAAT-TTGTTTACGAG 576
Query 6515 AACTCATGAATTTTTT 6530
||| |||||||| |||
Sbjct 577 AACACATGAATTCTTT 592
>seq1814
Length=63972
Score = 114 bits (126), Expect = 9e-22
Identities = 251/376 (67%), Gaps = 25/376 (7%)
Strand=Plus/Plus
Query 6166 ATGATTTAGTCATCGGCTTAAAAGGCAAGGAAAGAGAATTAAAAATAGCAGGTAGATTTT 6225
|||| ||||| ||||| | | || || ||| || | ||| || ||| |||||||
Sbjct 1637 ATGAGTTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTT 1693
Query 6226 TCTCTCTCATGTCTTGGAAATTGAGGGAATACTTTGTGATCACAGAGTACTTAATTAAGA 6285
| |||||||| |||| | | || |||||||| || || ||||| || |||||||
Sbjct 1694 TTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGA 1753
Query 6286 CACATTTTGTGCCTCTATTTCATGGTCTCACCATGGCTGACGACATGACTGCAGTCATCA 6345
|||||||| ||||| | | || | || |||||||||||| || | || |||
Sbjct 1754 AGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCA 1813
Query 6346 AAAAGATGTTGGAAAGCTCATCTGGACAAGGTTTGTTAGATTACTCAGCGGTATG----- 6400
| |||||| || || |||||||||| ||| |||||| | ||||
Sbjct 1814 ACAAGATGATGCAAGCTTCATCTGGAC----------AGACCACTCAGAGTTATGATGAG 1863
Query 6401 -----CCTGGCCAACCATATAGATTATGAAAAATGGAACAATCACCAGCGAAAATTGTCA 6455
| | || || ||| | |||||||| || ||||||||| | || || | |
Sbjct 1864 GCGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGA 1923
Query 6456 AACGGTCCTGTCTTCAAGGTCATGGGCCAATTCCTTGGGTTTCCGAATCTAATATAC-AG 6514
|| | ||| |||||| |||||||| | ||| |||| || || ||| | | ||| ||
Sbjct 1924 AATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAAT-TTGTTTACGAG 1982
Query 6515 AACTCATGAATTTTTT 6530
||| |||||||| |||
Sbjct 1983 AACACATGAATTCTTT 1998
>seq1440
Length=90230
Score = 114 bits (126), Expect = 9e-22
Identities = 249/367 (68%), Gaps = 7/367 (2%)
Strand=Plus/Plus
Query 6166 ATGATTTAGTCATCGGCTTAAAAGGCAAGGAAAGAGAATTAAAAATAGCAGGTAGATTTT 6225
|||| ||||| ||||| | | || || ||| || | ||| || ||| |||||||
Sbjct 51975 ATGAATTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTT 52031
Query 6226 TCTCTCTCATGTCTTGGAAATTGAGGGAATACTTTGTGATCACAGAGTACTTAATTAAGA 6285
| |||||||| |||| | | || |||||||| || || ||||| || |||||||
Sbjct 52032 TTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGA 52091
Query 6286 CACATTTTGTGCCTCTATTTCATGGTCTCACCATGGCTGACGACATGACTGCAGTCATCA 6345
|||||||| ||||| | | || | || |||||||||||| || | || |||
Sbjct 52092 AGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCA 52151
Query 6346 AAAAGATGTTGGAAAGCTCATCTGGACA-AGGTTTGTTAGATTACTCAGCGGTATGCCTG 6404
| |||||| || || ||||||||||| | | || ||| | ||| | |
Sbjct 52152 ACAAGATGATGCAAGCTTCATCTGGACAGACCACTCACAG-TTATGATGAGGTGACCATA 52210
Query 6405 GCCAACCATATAGATTATGAAAAATGGAACAATCACCAGCGAAAATTGTCAAACGGTCCT 6464
|| || ||| | |||||||| || ||||||||| | || || | ||| | |||
Sbjct 52211 GCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCG 52270
Query 6465 GTCTTCAAGGTCATGGGCCAATTCCTTGGGTTTCCGAATCTAATATAC-AGAACTCATGA 6523
|||||| |||||||| | ||| |||| || || ||| | | ||| ||||| |||||
Sbjct 52271 GTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAAT-TTGTTTACGAGAACACATGA 52329
Query 6524 ATTTTTT 6530
||| |||
Sbjct 52330 ATTCTTT 52336
>seq9517
Length=2557
Score = 111 bits (122), Expect = 1e-20
Identities = 250/376 (66%), Gaps = 25/376 (7%)
Strand=Plus/Plus
Query 6166 ATGATTTAGTCATCGGCTTAAAAGGCAAGGAAAGAGAATTAAAAATAGCAGGTAGATTTT 6225
|||| ||||| ||||| | | || || ||| || | ||| || ||| |||||||
Sbjct 556 ATGAGTTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTT 612
Query 6226 TCTCTCTCATGTCTTGGAAATTGAGGGAATACTTTGTGATCACAGAGTACTTAATTAAGA 6285
| |||||||| |||| | | || |||||||| || || ||||| || |||||||
Sbjct 613 TTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGA 672
Query 6286 CACATTTTGTGCCTCTATTTCATGGTCTCACCATGGCTGACGACATGACTGCAGTCATCA 6345
|||||||| ||||| | | || | || |||||||||||| | | || |||
Sbjct 673 AGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCA 732
Query 6346 AAAAGATGTTGGAAAGCTCATCTGGACAAGGTTTGTTAGATTACTCAGCGGTATG----- 6400
| |||||| || || |||||||||| ||| |||||| | ||||
Sbjct 733 ACAAGATGATGCAAGCTTCATCTGGAC----------AGACCACTCAGAGTTATGATGAG 782
Query 6401 -----CCTGGCCAACCATATAGATTATGAAAAATGGAACAATCACCAGCGAAAATTGTCA 6455
| | || || ||| | |||||||| || ||||||||| | || || | |
Sbjct 783 GCGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGA 842
Query 6456 AACGGTCCTGTCTTCAAGGTCATGGGCCAATTCCTTGGGTTTCCGAATCTAATATAC-AG 6514
|| | ||| |||||| |||||||| | ||| |||| || || ||| | | ||| ||
Sbjct 843 AATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAAT-TTGTTTACGAG 901
Query 6515 AACTCATGAATTTTTT 6530
||| |||||||| |||
Sbjct 902 AACACATGAATTCTTT 917
>seq2296
Length=40579
Score = 89.7 bits (98), Expect = 4e-14
Identities = 145/208 (70%), Gaps = 3/208 (1%)
Strand=Plus/Plus
Query 6166 ATGATTTAGTCATCGGCTTAAAAGGCAAGGAAAGAGAATTAAAAATAGCAGGTAGATTTT 6225
|||| ||||| ||||| | | || || ||| || | ||| || ||| |||||||
Sbjct 1700 ATGAGTTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTT 1756
Query 6226 TCTCTCTCATGTCTTGGAAATTGAGGGAATACTTTGTGATCACAGAGTACTTAATTAAGA 6285
| |||||||| |||| | | || |||||||| || || ||||| || |||||||
Sbjct 1757 TTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGA 1816
Query 6286 CACATTTTGTGCCTCTATTTCATGGTCTCACCATGGCTGACGACATGACTGCAGTCATCA 6345
|||||||| ||||| | | || | || |||||||||||| | | || |||
Sbjct 1817 AGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCA 1876
Query 6346 AAAAGATGTTGGAAAGCTCATCTGGACA 6373
| |||||| || || |||||||||||
Sbjct 1877 ACAAGATGATGCAAGCTTCATCTGGACA 1904
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35125597321080
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |