Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_025394.1 Length=11103 Score E Sequences producing significant alignments: (Bits) Value seq1440 127 1e-25 seq9517 120 2e-23 seq8251 120 2e-23 seq1814 120 2e-23 >seq1440 Length=90230 Score = 127 bits (140), Expect = 1e-25 Identities = 294/433 (68%), Gaps = 20/433 (5%) Strand=Plus/Plus Query 6336 CGGGAATACTTTGTAATTACTGAGTATTTGATTAAAACACACTTTGTTCCGTTATTTCAT 6395 || || |||||||| || || |||||||||||||| | || |||||||| | | | Sbjct 52055 CGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACA 52114 Query 6396 GGATTGACTATGGCAGATGATATGACGGCTGTGATCaaaaaaaTGATGGAGAGTTCATCA 6455 ||||| || ||||| || || || | || |||| || |||||| | |||||| Sbjct 52115 GGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCT 52174 Query 6456 GGTCAGGGT-CTCAACGATTATTCTTCAATATGTC--TGGCTAATCACATTGATTATGAG 6512 || ||| |||| | |||| | | || | | || ||||| ||||||||||| Sbjct 52175 GGACAGACCACTCACAG-TTATGATG--AGGTGACCATAGCAAATCATGTTGATTATGAG 52231 Query 6513 AAATGGAACAATCATCAGAGAAAAGAGTCAAATGGACCTGTTTTCCGTGTCATGGGTCAG 6572 || ||||||||| |||| ||| ||| ||||| || || ||| |||||||||| Sbjct 52232 AAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGA 52291 Query 6573 TTCTTGGGATTTCCTAACCTTATATCCAGGACTCATGAATTCTTT--GAAAAAAGTCTGA 6630 || || ||||| ||||| | | | || || |||||||||||| | | | ||| Sbjct 52292 TTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCT-- 52349 Query 6631 TATATTACAATGGGAGACCAGATTTGATGAAAGTGCAAGGAAATTCATTAGTCAATAACA 6690 | |||||||| | |||||||||| ||| | ||||| | || || ||| ||||| Sbjct 52350 TCTATTACAAAGATCGACCAGATTTAATGGTTATAGAAGGAGA--CAGTA-TCACTAACA 52406 Query 6691 GCAATCAGCGG-----GTATGTTGGAACGGACAGGCAGGAGGTTTGGAGGGCTTGAGGCA 6745 || ||| || || |||||| | || || || || |||| || ||||| | || Sbjct 52407 GC--CCAGGGGAGTTTGTCTGTTGGCAAGGCCAAGCCGGTGGTTGCGAAGGCTTACGTCA 52464 Query 6746 AAAGGGATGGAGT 6758 || || |||||| Sbjct 52465 GAAAGGTTGGAGT 52477 >seq9517 Length=2557 Score = 120 bits (132), Expect = 2e-23 Identities = 294/437 (67%), Gaps = 28/437 (6%) Strand=Plus/Plus Query 6336 CGGGAATACTTTGTAATTACTGAGTATTTGATTAAAACACACTTTGTTCCGTTATTTCAT 6395 || || |||||||| || || |||||||||||||| | || |||||||| | | | Sbjct 636 CGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACA 695 Query 6396 GGATTGACTATGGCAGATGA-TATGACGGCTGTGATCaaaaaaaTGATGGAGAGTTCATC 6454 ||||| || ||||| || || || || | || |||| || |||||| | |||||| Sbjct 696 GGATTAACAATGGCTGACGACTACAACACC-GTAGTCAACAAGATGATGCAAGCTTCATC 754 Query 6455 AGGTCAGGGT-CTCA-----ACGATTATTCTTCAATATGTCTGGCTAATCACATTGATTA 6508 || ||| |||| | ||| | | | ||| || ||||| ||||||| Sbjct 755 TGGACAGACCACTCAGAGTTATGATGAGGCGACCATA------GCAAATCATGTTGATTA 808 Query 6509 TGAGAAATGGAACAATCATCAGAGAAAAGAGTCAAATGGACCTGTTTTCCGTGTCATGGG 6568 |||||| ||||||||| |||| ||| ||| ||||| || || ||| |||||||| Sbjct 809 TGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGG 868 Query 6569 TCAGTTCTTGGGATTTCCTAACCTTATATCCAGGACTCATGAATTCTTT--GAAAAAAGT 6626 || || || ||||| ||||| | | | || || |||||||||||| | | | | Sbjct 869 TCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATT 928 Query 6627 CTGATATATTACAATGGGAGACCAGATTTGATGAAAGTGCAAGGAAATTCATTAGTCAAT 6686 || | |||||||| | |||||||||| || | ||||| | || || ||| | Sbjct 929 CT--TCTATTACAAAGATCGACCAGATTTAATAGTTATAGAAGGAGA--CAGTA-TCACT 983 Query 6687 AACAGCAATCAGCGG-----GTATGTTGGAACGGACAGGCAGGAGGTTTGGAGGGCTTGA 6741 |||||| ||| || || |||||| | || || || || |||| || ||||| Sbjct 984 AACAGC--CCAGGGGAGTTTGTCTGTTGGCAAGGCCAAGCCGGTGGTTGCGAAGGCTTAC 1041 Query 6742 GGCAAAAGGGATGGAGT 6758 | || || || |||||| Sbjct 1042 GTCAGAAAGGTTGGAGT 1058 >seq8251 Length=2688 Score = 120 bits (132), Expect = 2e-23 Identities = 292/436 (67%), Gaps = 26/436 (6%) Strand=Plus/Plus Query 6336 CGGGAATACTTTGTAATTACTGAGTATTTGATTAAAACACACTTTGTTCCGTTATTTCAT 6395 || || |||||||| || || |||||||||||||| | || |||||||| | | | Sbjct 311 CGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACA 370 Query 6396 GGATTGACTATGGCAGATGATATGACGGCTGTGATCaaaaaaaTGATGGAGAGTTCATCA 6455 ||||| || ||||| || || || | || |||| || |||||| | |||||| Sbjct 371 GGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCT 430 Query 6456 GGTCAGGGT-CTCA-----ACGATTATTCTTCAATATGTCTGGCTAATCACATTGATTAT 6509 || ||| |||| | ||| | | | ||| || ||||| |||||||| Sbjct 431 GGACAGACCACTCAGAGTTATGATGAGGCGACCATA------GCAAATCATGTTGATTAT 484 Query 6510 GAGAAATGGAACAATCATCAGAGAAAAGAGTCAAATGGACCTGTTTTCCGTGTCATGGGT 6569 ||||| ||||||||| |||| ||| ||| ||||| || || ||| ||||||||| Sbjct 485 GAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGT 544 Query 6570 CAGTTCTTGGGATTTCCTAACCTTATATCCAGGACTCATGAATTCTTT--GAAAAAAGTC 6627 | || || ||||| ||||| | | | || || |||||||||||| | | | || Sbjct 545 CGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTC 604 Query 6628 TGATATATTACAATGGGAGACCAGATTTGATGAAAGTGCAAGGAAATTCATTAGTCAATA 6687 | | |||||||| | |||||||||| || | ||||| | || || ||| || Sbjct 605 T--TCTATTACAAAGATCGACCAGATTTAATAGTTATAGAAGGAGA--CAGTA-TCACTA 659 Query 6688 ACAGCAATCAGCGG-----GTATGTTGGAACGGACAGGCAGGAGGTTTGGAGGGCTTGAG 6742 ||||| ||| || || |||||| | || || || || |||| || ||||| | Sbjct 660 ACAGC--CCAGGGGAGTTTGTCTGTTGGCAAGGCCAAGCCGGTGGTTGCGAAGGCTTACG 717 Query 6743 GCAAAAGGGATGGAGT 6758 || || || |||||| Sbjct 718 TCAGAAAGGTTGGAGT 733 >seq1814 Length=63972 Score = 120 bits (132), Expect = 2e-23 Identities = 292/436 (67%), Gaps = 26/436 (6%) Strand=Plus/Plus Query 6336 CGGGAATACTTTGTAATTACTGAGTATTTGATTAAAACACACTTTGTTCCGTTATTTCAT 6395 || || |||||||| || || |||||||||||||| | || |||||||| | | | Sbjct 1717 CGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACA 1776 Query 6396 GGATTGACTATGGCAGATGATATGACGGCTGTGATCaaaaaaaTGATGGAGAGTTCATCA 6455 ||||| || ||||| || || || | || |||| || |||||| | |||||| Sbjct 1777 GGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCT 1836 Query 6456 GGTCAGGGT-CTCA-----ACGATTATTCTTCAATATGTCTGGCTAATCACATTGATTAT 6509 || ||| |||| | ||| | | | ||| || ||||| |||||||| Sbjct 1837 GGACAGACCACTCAGAGTTATGATGAGGCGACCATA------GCAAATCATGTTGATTAT 1890 Query 6510 GAGAAATGGAACAATCATCAGAGAAAAGAGTCAAATGGACCTGTTTTCCGTGTCATGGGT 6569 ||||| ||||||||| |||| ||| ||| ||||| || || ||| ||||||||| Sbjct 1891 GAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGT 1950 Query 6570 CAGTTCTTGGGATTTCCTAACCTTATATCCAGGACTCATGAATTCTTT--GAAAAAAGTC 6627 | || || ||||| ||||| | | | || || |||||||||||| | | | || Sbjct 1951 CGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTC 2010 Query 6628 TGATATATTACAATGGGAGACCAGATTTGATGAAAGTGCAAGGAAATTCATTAGTCAATA 6687 | | |||||||| | |||||||||| || | ||||| | || || ||| || Sbjct 2011 T--TCTATTACAAAGATCGACCAGATTTAATAGTTATAGAAGGAGA--CAGTA-TCACTA 2065 Query 6688 ACAGCAATCAGCGG-----GTATGTTGGAACGGACAGGCAGGAGGTTTGGAGGGCTTGAG 6742 ||||| ||| || || |||||| | || || || || |||| || ||||| | Sbjct 2066 ACAGC--CCAGGGGAGTTTGTCTGTTGGCAAGGCCAAGCCGGTGGTTGCGAAGGCTTACG 2123 Query 6743 GCAAAAGGGATGGAGT 6758 || || || |||||| Sbjct 2124 TCAGAAAGGTTGGAGT 2139 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35394244336920