Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_025396.1
Length=15442
Score E
Sequences producing significant alignments: (Bits) Value
seq1440 138 1e-28
seq8251 136 4e-28
seq1814 136 4e-28
seq9517 132 5e-27
seq2296 113 4e-21
>seq1440
Length=90230
Score = 138 bits (152), Expect = 1e-28
Identities = 272/402 (68%), Gaps = 3/402 (1%)
Strand=Plus/Plus
Query 10578 TTGGTGATAGGTTTAAAAGCCAAGGAAAGAGAGCTTAAAGAAGAAGGTAGGTTTTTCTCT 10637
|| ||||| ||| | | ||| || ||| ||||| ||| | |||| || ||||| ||
Sbjct 51980 TTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCT 52036
Query 10638 TTAATGAGTTATGAGTTAAGAGACTACTTTGTTGCAACTGAATACTTGATTAAGAAATAT 10697
| ||||||| | | || |||||||| ||| || || ||||||||||| ||
Sbjct 52037 CTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCAT 52096
Query 10698 TATGTACCATTGTTTGAAGGACTTACAATGGCAGATGATTTGAACACTGTAATTAAAAAG 10757
| ||| || | | | |||| | |||||||| || || | |||||| ||| | || |||
Sbjct 52097 TTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAG 52156
Query 10758 ATGCTGGACGTGTCATCCGGTCAAGGAACAAGAAACTATGATTATGTATCCATAGCCAAC 10817
||| || | | ||||| || || || | |||||| | || ||||||| ||
Sbjct 52157 ATGATGCAAGCTTCATCTGGACAGACCACTCACAGTTATGATGAGGTGACCATAGCAAAT 52216
Query 10818 AACATTGATTATGAGAAATGGAATAATTATCAAAGGAAAGAATCAAATGGACCGGTATTC 10877
| ||||||||||||| ||||| ||||||||||| || ||||| ||||| |||
Sbjct 52217 CATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTC 52276
Query 10878 AGAGTAATGGGACAATTCCTTGGAATGGAAAATCTTATAGTTCGGACACATGAATTCTTT 10937
||| ||||| | ||| ||||| | ||| | | | |||||||||||||||
Sbjct 52277 TCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTT 52336
Query 10938 GAAAATAGTTTGGTCTATTATAACCAGCGAGCAGACTTAATG 10979
|| || ||||||| || | ||| |||| ||||||
Sbjct 52337 CGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAATG 52378
>seq8251
Length=2688
Score = 136 bits (150), Expect = 4e-28
Identities = 276/406 (68%), Gaps = 9/406 (2%)
Strand=Plus/Plus
Query 10576 AGTTGGTGATAGGTTTAAAAGCCAAGGAAAGAGAGCTTAAAGAAGAAGGTAGGTTTTTCT 10635
|||| ||||| ||| | | ||| || ||| ||||| ||| | |||| || |||||
Sbjct 234 AGTTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTG 290
Query 10636 CTTTAATGAGTTATGAGTTAAGAGACTACTTTGTTGCAACTGAATACTTGATTAAGAAAT 10695
|| | ||||||| | | || |||||||| ||| || || |||||||||||
Sbjct 291 CTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGC 350
Query 10696 ATTATGTACCATTGTTTGAAGGACTTACAATGGCAGATGATTTGAACACTGTAATTAAAA 10755
||| ||| || | | | |||| | |||||||| || || | |||||| ||| | || |
Sbjct 351 ATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACA 410
Query 10756 AGATGCTGGACGTGTCATCCGGTCAAGGAACA---AGAAACTATGATTATGTATCCATAG 10812
||||| || | | ||||| || || || || || | |||||| | | ||||||
Sbjct 411 AGATGATGCAAGCTTCATCTGGACA--GACCACTCAG-AGTTATGATGAGGCGACCATAG 467
Query 10813 CCAACAACATTGATTATGAGAAATGGAATAATTATCAAAGGAAAGAATCAAATGGACCGG 10872
| || | ||||||||||||| ||||| ||||||||||| || ||||| ||||
Sbjct 468 CAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGG 527
Query 10873 TATTCAGAGTAATGGGACAATTCCTTGGAATGGAAAATCTTATAGTTCGGACACATGAAT 10932
| ||| ||| ||||| | ||| ||||| | ||| | | | ||||||||||
Sbjct 528 TCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAAT 587
Query 10933 TCTTTGAAAATAGTTTGGTCTATTATAACCAGCGAGCAGACTTAAT 10978
||||| || || ||||||| || | ||| |||| |||||
Sbjct 588 TCTTTCGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAAT 633
>seq1814
Length=63972
Score = 136 bits (150), Expect = 4e-28
Identities = 276/406 (68%), Gaps = 9/406 (2%)
Strand=Plus/Plus
Query 10576 AGTTGGTGATAGGTTTAAAAGCCAAGGAAAGAGAGCTTAAAGAAGAAGGTAGGTTTTTCT 10635
|||| ||||| ||| | | ||| || ||| ||||| ||| | |||| || |||||
Sbjct 1640 AGTTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTG 1696
Query 10636 CTTTAATGAGTTATGAGTTAAGAGACTACTTTGTTGCAACTGAATACTTGATTAAGAAAT 10695
|| | ||||||| | | || |||||||| ||| || || |||||||||||
Sbjct 1697 CTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGC 1756
Query 10696 ATTATGTACCATTGTTTGAAGGACTTACAATGGCAGATGATTTGAACACTGTAATTAAAA 10755
||| ||| || | | | |||| | |||||||| || || | |||||| ||| | || |
Sbjct 1757 ATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACA 1816
Query 10756 AGATGCTGGACGTGTCATCCGGTCAAGGAACA---AGAAACTATGATTATGTATCCATAG 10812
||||| || | | ||||| || || || || || | |||||| | | ||||||
Sbjct 1817 AGATGATGCAAGCTTCATCTGGACA--GACCACTCAG-AGTTATGATGAGGCGACCATAG 1873
Query 10813 CCAACAACATTGATTATGAGAAATGGAATAATTATCAAAGGAAAGAATCAAATGGACCGG 10872
| || | ||||||||||||| ||||| ||||||||||| || ||||| ||||
Sbjct 1874 CAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGG 1933
Query 10873 TATTCAGAGTAATGGGACAATTCCTTGGAATGGAAAATCTTATAGTTCGGACACATGAAT 10932
| ||| ||| ||||| | ||| ||||| | ||| | | | ||||||||||
Sbjct 1934 TCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAAT 1993
Query 10933 TCTTTGAAAATAGTTTGGTCTATTATAACCAGCGAGCAGACTTAAT 10978
||||| || || ||||||| || | ||| |||| |||||
Sbjct 1994 TCTTTCGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAAT 2039
>seq9517
Length=2557
Score = 132 bits (146), Expect = 5e-27
Identities = 275/406 (68%), Gaps = 9/406 (2%)
Strand=Plus/Plus
Query 10576 AGTTGGTGATAGGTTTAAAAGCCAAGGAAAGAGAGCTTAAAGAAGAAGGTAGGTTTTTCT 10635
|||| ||||| ||| | | ||| || ||| ||||| ||| | |||| || |||||
Sbjct 559 AGTTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTG 615
Query 10636 CTTTAATGAGTTATGAGTTAAGAGACTACTTTGTTGCAACTGAATACTTGATTAAGAAAT 10695
|| | ||||||| | | || |||||||| ||| || || |||||||||||
Sbjct 616 CTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGC 675
Query 10696 ATTATGTACCATTGTTTGAAGGACTTACAATGGCAGATGATTTGAACACTGTAATTAAAA 10755
||| ||| || | | | |||| | |||||||| || || | ||||| ||| | || |
Sbjct 676 ATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCAACA 735
Query 10756 AGATGCTGGACGTGTCATCCGGTCAAGGAACA---AGAAACTATGATTATGTATCCATAG 10812
||||| || | | ||||| || || || || ||| |||||| | | ||||||
Sbjct 736 AGATGATGCAAGCTTCATCTGGACA--GACCACTCAGAGT-TATGATGAGGCGACCATAG 792
Query 10813 CCAACAACATTGATTATGAGAAATGGAATAATTATCAAAGGAAAGAATCAAATGGACCGG 10872
| || | ||||||||||||| ||||| ||||||||||| || ||||| ||||
Sbjct 793 CAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGG 852
Query 10873 TATTCAGAGTAATGGGACAATTCCTTGGAATGGAAAATCTTATAGTTCGGACACATGAAT 10932
| ||| ||| ||||| | ||| ||||| | ||| | | | ||||||||||
Sbjct 853 TCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAAT 912
Query 10933 TCTTTGAAAATAGTTTGGTCTATTATAACCAGCGAGCAGACTTAAT 10978
||||| || || ||||||| || | ||| |||| |||||
Sbjct 913 TCTTTCGGGATTCATTCTTCTATTACAAAGATCGACCAGATTTAAT 958
>seq2296
Length=40579
Score = 113 bits (124), Expect = 4e-21
Identities = 195/280 (70%), Gaps = 9/280 (3%)
Strand=Plus/Plus
Query 10576 AGTTGGTGATAGGTTTAAAAGCCAAGGAAAGAGAGCTTAAAGAAGAAGGTAGGTTTTTCT 10635
|||| ||||| ||| | | ||| || ||| ||||| ||| | |||| || |||||
Sbjct 1703 AGTTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTG 1759
Query 10636 CTTTAATGAGTTATGAGTTAAGAGACTACTTTGTTGCAACTGAATACTTGATTAAGAAAT 10695
|| | ||||||| | | || |||||||| ||| || || |||||||||||
Sbjct 1760 CTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGC 1819
Query 10696 ATTATGTACCATTGTTTGAAGGACTTACAATGGCAGATGATTTGAACACTGTAATTAAAA 10755
||| ||| || | | | |||| | |||||||| || || | ||||| ||| | || |
Sbjct 1820 ATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCAACA 1879
Query 10756 AGATGCTGGACGTGTCATCCGGTCAAGGAACA---AGAAACTATGATTATGTATCCATAG 10812
||||| || | | ||||| || || || || || | |||||| | | ||||||
Sbjct 1880 AGATGATGCAAGCTTCATCTGGACA--GACCACTCAG-AGTTATGATGAGGCGACCATAG 1936
Query 10813 CCAACAACATTGATTATGAGAAATGGAATAATTATCAAAG 10852
| || | ||||||||||||| ||||| |||||||||||
Sbjct 1937 CAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAG 1976
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 49267164458850
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |