Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_025400.1 Length=15444 Score E Sequences producing significant alignments: (Bits) Value seq1440 132 5e-27 seq8251 131 2e-26 seq1814 131 2e-26 seq9517 125 7e-25 seq2296 96.9 3e-16 >seq1440 Length=90230 Score = 132 bits (146), Expect = 5e-27 Identities = 304/457 (67%), Gaps = 3/457 (1%) Strand=Plus/Plus Query 10537 ATTTTTACAAAGGGTGAATGATCATGGATTAGATTGGGAGAAGTTGGTGATAGGTTTAAA 10596 |||||| || | | | || || || ||| || || | | || ||||| ||| | | Sbjct 51937 ATTTTTGCAGATGATAAACGACCAGGGACTATCCAGGAATGAATTAGTGATCGGTCTGAG 51996 Query 10597 AGCCAAAGAAAGGGAGCTTAAAGAAGAAGGCAGGTTTTTCTCTTTAATGAGTTATGAGTT 10656 ||| |||||| ||||| ||| | |||| || ||||| || | ||||||| | Sbjct 51997 AGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCT 52053 Query 10657 AAGAGACTACTTTGTTGCAACTGAATACTTGATCAAAAAATATTATGTACCATTATTCGA 10716 | || |||||||| ||| || || ||||| || || ||| ||| || | | Sbjct 52054 TCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTAC 52113 Query 10717 AGGACTTACAATGGCGGATGATTTGAATACAGTCATCAAAAAGATGCTGGATGTGTCCTC 10776 |||| | |||||||| || || | ||| || || |||| |||||| || | | || || Sbjct 52114 AGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATC 52173 Query 10777 CGGCCAAGGAACAAGAAACTATGATTATGTGTCAATAGCTAACAATATTGATTATGAAAA 10836 || || || | |||||| | ||| | ||||| || || |||||||||| || Sbjct 52174 TGGACAGACCACTCACAGTTATGATGAGGTGACCATAGCAAATCATGTTGATTATGAGAA 52233 Query 10837 ATGGAATAATTATCAAAGAAAAGAATCAAATGGACCAGTATTCAGAGTAATGGGGCAATT 10896 ||||| |||||||||||| || ||||| || || ||| ||| ||||| | ||| Sbjct 52234 GTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATT 52293 Query 10897 CCTTGGAATGGAAAATTTGATAGTTCGGACACATGAATTCTTTGAAAATAGTTTGGTTTA 10956 ||||| | |||||| | | ||||||||||||||| || || | || Sbjct 52294 TTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCTTCTA 52353 Query 10957 TTATAACCAGCGAGCAGATTTAATGATGGTACAAGGA 10993 ||| || | ||| ||||||||||| | || ||||| Sbjct 52354 TTACAAAGATCGACCAGATTTAATGGTTATAGAAGGA 52390 >seq8251 Length=2688 Score = 131 bits (144), Expect = 2e-26 Identities = 307/460 (67%), Gaps = 9/460 (2%) Strand=Plus/Plus Query 10537 ATTTTTACAAAGGGTGAATGATCATGGATTAGATTGGGAGAAGTTGGTGATAGGTTTAAA 10596 |||||| || | | | || || || ||| || || | |||| ||||| ||| | | Sbjct 193 ATTTTTGCAGATGATAAACGACCAGGGACTATCCAGGAATGAGTTAGTGATCGGTCTGAG 252 Query 10597 AGCCAAAGAAAGGGAGCTTAAAGAAGAAGGCAGGTTTTTCTCTTTAATGAGTTATGAGTT 10656 ||| |||||| ||||| ||| | |||| || ||||| || | ||||||| | Sbjct 253 AGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCT 309 Query 10657 AAGAGACTACTTTGTTGCAACTGAATACTTGATCAAAAAATATTATGTACCATTATTCGA 10716 | || |||||||| ||| || || ||||| || || ||| ||| || | | Sbjct 310 TCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTAC 369 Query 10717 AGGACTTACAATGGCGGATGATTTGAATACAGTCATCAAAAAGATGCTGGATGTGTCCTC 10776 |||| | |||||||| || || | ||| || || |||| |||||| || | | || || Sbjct 370 AGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATC 429 Query 10777 CGGCCAAGGAACA---AGAAACTATGATTATGTGTCAATAGCTAACAATATTGATTATGA 10833 || || || || ||| |||||| | | | | ||||| || || |||||||||| Sbjct 430 TGGACA--GACCACTCAGAGT-TATGATGAGGCGACCATAGCAAATCATGTTGATTATGA 486 Query 10834 AAAATGGAATAATTATCAAAGAAAAGAATCAAATGGACCAGTATTCAGAGTAATGGGGCA 10893 || ||||| |||||||||||| || ||||| || || ||| ||| ||||| | Sbjct 487 GAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCG 546 Query 10894 ATTCCTTGGAATGGAAAATTTGATAGTTCGGACACATGAATTCTTTGAAAATAGTTTGGT 10953 ||| ||||| | |||||| | | ||||||||||||||| || || | Sbjct 547 ATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCTT 606 Query 10954 TTATTATAACCAGCGAGCAGATTTAATGATGGTACAAGGA 10993 ||||| || | ||| |||||||||| | || ||||| Sbjct 607 CTATTACAAAGATCGACCAGATTTAATAGTTATAGAAGGA 646 >seq1814 Length=63972 Score = 131 bits (144), Expect = 2e-26 Identities = 307/460 (67%), Gaps = 9/460 (2%) Strand=Plus/Plus Query 10537 ATTTTTACAAAGGGTGAATGATCATGGATTAGATTGGGAGAAGTTGGTGATAGGTTTAAA 10596 |||||| || | | | || || || ||| || || | |||| ||||| ||| | | Sbjct 1599 ATTTTTGCAGATGATAAACGACCAGGGACTATCCAGGAATGAGTTAGTGATCGGTCTGAG 1658 Query 10597 AGCCAAAGAAAGGGAGCTTAAAGAAGAAGGCAGGTTTTTCTCTTTAATGAGTTATGAGTT 10656 ||| |||||| ||||| ||| | |||| || ||||| || | ||||||| | Sbjct 1659 AGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCT 1715 Query 10657 AAGAGACTACTTTGTTGCAACTGAATACTTGATCAAAAAATATTATGTACCATTATTCGA 10716 | || |||||||| ||| || || ||||| || || ||| ||| || | | Sbjct 1716 TCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTAC 1775 Query 10717 AGGACTTACAATGGCGGATGATTTGAATACAGTCATCAAAAAGATGCTGGATGTGTCCTC 10776 |||| | |||||||| || || | ||| || || |||| |||||| || | | || || Sbjct 1776 AGGATTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATC 1835 Query 10777 CGGCCAAGGAACA---AGAAACTATGATTATGTGTCAATAGCTAACAATATTGATTATGA 10833 || || || || ||| |||||| | | | | ||||| || || |||||||||| Sbjct 1836 TGGACA--GACCACTCAGAGT-TATGATGAGGCGACCATAGCAAATCATGTTGATTATGA 1892 Query 10834 AAAATGGAATAATTATCAAAGAAAAGAATCAAATGGACCAGTATTCAGAGTAATGGGGCA 10893 || ||||| |||||||||||| || ||||| || || ||| ||| ||||| | Sbjct 1893 GAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCG 1952 Query 10894 ATTCCTTGGAATGGAAAATTTGATAGTTCGGACACATGAATTCTTTGAAAATAGTTTGGT 10953 ||| ||||| | |||||| | | ||||||||||||||| || || | Sbjct 1953 ATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCTT 2012 Query 10954 TTATTATAACCAGCGAGCAGATTTAATGATGGTACAAGGA 10993 ||||| || | ||| |||||||||| | || ||||| Sbjct 2013 CTATTACAAAGATCGACCAGATTTAATAGTTATAGAAGGA 2052 >seq9517 Length=2557 Score = 125 bits (138), Expect = 7e-25 Identities = 306/460 (67%), Gaps = 9/460 (2%) Strand=Plus/Plus Query 10537 ATTTTTACAAAGGGTGAATGATCATGGATTAGATTGGGAGAAGTTGGTGATAGGTTTAAA 10596 |||||| || | | | || || || ||| || || | |||| ||||| ||| | | Sbjct 518 ATTTTTGCAGATGATAAACGACCAGGGACTATCCAGGAATGAGTTAGTGATCGGTCTGAG 577 Query 10597 AGCCAAAGAAAGGGAGCTTAAAGAAGAAGGCAGGTTTTTCTCTTTAATGAGTTATGAGTT 10656 ||| |||||| ||||| ||| | |||| || ||||| || | ||||||| | Sbjct 578 AGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCT 634 Query 10657 AAGAGACTACTTTGTTGCAACTGAATACTTGATCAAAAAATATTATGTACCATTATTCGA 10716 | || |||||||| ||| || || ||||| || || ||| ||| || | | Sbjct 635 TCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTAC 694 Query 10717 AGGACTTACAATGGCGGATGATTTGAATACAGTCATCAAAAAGATGCTGGATGTGTCCTC 10776 |||| | |||||||| || || | || || || |||| |||||| || | | || || Sbjct 695 AGGATTAACAATGGCTGACGACTACAACACCGTAGTCAACAAGATGATGCAAGCTTCATC 754 Query 10777 CGGCCAAGGAACA---AGAAACTATGATTATGTGTCAATAGCTAACAATATTGATTATGA 10833 || || || || ||| |||||| | | | | ||||| || || |||||||||| Sbjct 755 TGGACA--GACCACTCAGAGT-TATGATGAGGCGACCATAGCAAATCATGTTGATTATGA 811 Query 10834 AAAATGGAATAATTATCAAAGAAAAGAATCAAATGGACCAGTATTCAGAGTAATGGGGCA 10893 || ||||| |||||||||||| || ||||| || || ||| ||| ||||| | Sbjct 812 GAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCG 871 Query 10894 ATTCCTTGGAATGGAAAATTTGATAGTTCGGACACATGAATTCTTTGAAAATAGTTTGGT 10953 ||| ||||| | |||||| | | ||||||||||||||| || || | Sbjct 872 ATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCTT 931 Query 10954 TTATTATAACCAGCGAGCAGATTTAATGATGGTACAAGGA 10993 ||||| || | ||| |||||||||| | || ||||| Sbjct 932 CTATTACAAAGATCGACCAGATTTAATAGTTATAGAAGGA 971 >seq2296 Length=40579 Score = 96.9 bits (106), Expect = 3e-16 Identities = 192/281 (68%), Gaps = 9/281 (3%) Strand=Plus/Plus Query 10578 AGTTGGTGATAGGTTTAAAAGCCAAAGAAAGGGAGCTTAAAGAAGAAGGCAGGTTTTTCT 10637 |||| ||||| ||| | | ||| |||||| ||||| ||| | |||| || ||||| Sbjct 1703 AGTTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTG 1759 Query 10638 CTTTAATGAGTTATGAGTTAAGAGACTACTTTGTTGCAACTGAATACTTGATCAAAAAAT 10697 || | ||||||| | | || |||||||| ||| || || ||||| || || Sbjct 1760 CTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGC 1819 Query 10698 ATTATGTACCATTATTCGAAGGACTTACAATGGCGGATGATTTGAATACAGTCATCAAAA 10757 ||| ||| || | | |||| | |||||||| || || | || || || |||| | Sbjct 1820 ATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAACACCGTAGTCAACA 1879 Query 10758 AGATGCTGGATGTGTCCTCCGGCCAAGGAACA---AGAAACTATGATTATGTGTCAATAG 10814 ||||| || | | || || || || || || ||| |||||| | | | | |||| Sbjct 1880 AGATGATGCAAGCTTCATCTGGACA--GACCACTCAGAGT-TATGATGAGGCGACCATAG 1936 Query 10815 CTAACAATATTGATTATGAAAAATGGAATAATTATCAAAGA 10855 | || || |||||||||| || ||||| |||||||||||| Sbjct 1937 CAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGA 1977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 49273560715190