Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_025406.1 Length=11141 Score E Sequences producing significant alignments: (Bits) Value seq9517 123 2e-24 seq8251 123 2e-24 seq1814 123 2e-24 seq1440 123 2e-24 seq2296 98.7 7e-17 >seq9517 Length=2557 Score = 123 bits (136), Expect = 2e-24 Identities = 334/496 (67%), Gaps = 19/496 (4%) Strand=Plus/Plus Query 6332 AAAGA-GAGCTGAAACAAGCAGGTAGATTCTTTTCATTGATGTCATGGGAGTTACGAGAG 6390 ||||| |||||||||| | ||| ||||| ||| | | ||| ||| | || || Sbjct 582 AAAGAAGAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGAT 641 Query 6391 TACTTTGTCATTACCGAATATTTAATAAAACACCATTTTGTACCTCTATTTAAGGGATTA 6450 ||||||||||| || || ||||| || || | |||||||| ||||| | || |||||| Sbjct 642 TACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTA 701 Query 6451 ACAATGGCAGATGA-TATGACAGAAGTGATCAAAAAGATGCTGGAAAGAAGTCA--AGGC 6507 |||||||| || || || ||| || |||| |||||| || || ||| || Sbjct 702 ACAATGGCTGACGACTACAACA-CCGTAGTCAACAAGATGATGCAA--GCTTCATCTGGA 758 Query 6508 CAAGGAGAATTAGA-CTATCAACATGTGAGCATAGCGAACCATATAGATTATGAAAAGTG 6566 | || | | ||| ||| | | | || |||||| || ||| | |||||||| ||||| Sbjct 759 C-AGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTG 817 Query 6567 GAACAATCATCAAAGGAAAGAATCAAATGGACCAGTTTTCCGTGTGATGGGCCAATTCTT 6626 ||||||| ||||||| || ||||| || || ||| || ||||| | ||| || Sbjct 818 GAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTT 877 Query 6627 GGGCTATCCATCTTTGATAGAGAGAACGCATGAGTTCTTT-GAGA-AAAGTCTTGTTTAT 6684 || | || |||| | |||||| ||||| |||||| | || | ||| | ||| Sbjct 878 TGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCT--TCTAT 935 Query 6685 TACAATGGTAGACCAGACTTGATGAAGGTAGAAAATGGTGTAGTATTGAATAAAA---CA 6741 ||||| | | ||||||| || || || || | || | |||| | | ||| | || Sbjct 936 TACAAAGATCGACCAGATTTAAT--AGTTATAGAAGGAGACAGTA-TCACTAACAGCCCA 992 Query 6742 GATAATTTAGTTTGCTGGAATGGTCAAGCAGGGGGGTTAGAGGGACTGAGACAAAAAGGT 6801 | | || || || ||| | || ||||| || || | || || | | || |||||| Sbjct 993 GGGGAGTTTGTCTGTTGGCAAGGCCAAGCCGGTGGTTGCGAAGGCTTACGTCAGAAAGGT 1052 Query 6802 TGGAGTATACTCAACT 6817 |||||| | |||||| Sbjct 1053 TGGAGTCTGGTCAACT 1068 >seq8251 Length=2688 Score = 123 bits (136), Expect = 2e-24 Identities = 334/496 (67%), Gaps = 19/496 (4%) Strand=Plus/Plus Query 6332 AAAGA-GAGCTGAAACAAGCAGGTAGATTCTTTTCATTGATGTCATGGGAGTTACGAGAG 6390 ||||| |||||||||| | ||| ||||| ||| | | ||| ||| | || || Sbjct 257 AAAGAAGAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGAT 316 Query 6391 TACTTTGTCATTACCGAATATTTAATAAAACACCATTTTGTACCTCTATTTAAGGGATTA 6450 ||||||||||| || || ||||| || || | |||||||| ||||| | || |||||| Sbjct 317 TACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTA 376 Query 6451 ACAATGGCAGATGA-TATGACAGAAGTGATCAAAAAGATGCTGGAAAGAAGTCA--AGGC 6507 |||||||| || || || ||| || |||| |||||| || || ||| || Sbjct 377 ACAATGGCTGACGACTAGAACA-CCGTAGTCAACAAGATGATGCAA--GCTTCATCTGGA 433 Query 6508 CAAGGAGAATTAGA-CTATCAACATGTGAGCATAGCGAACCATATAGATTATGAAAAGTG 6566 | || | | ||| ||| | | | || |||||| || ||| | |||||||| ||||| Sbjct 434 C-AGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTG 492 Query 6567 GAACAATCATCAAAGGAAAGAATCAAATGGACCAGTTTTCCGTGTGATGGGCCAATTCTT 6626 ||||||| ||||||| || ||||| || || ||| || ||||| | ||| || Sbjct 493 GAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTT 552 Query 6627 GGGCTATCCATCTTTGATAGAGAGAACGCATGAGTTCTTT-GAGA-AAAGTCTTGTTTAT 6684 || | || |||| | |||||| ||||| |||||| | || | ||| | ||| Sbjct 553 TGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCT--TCTAT 610 Query 6685 TACAATGGTAGACCAGACTTGATGAAGGTAGAAAATGGTGTAGTATTGAATAAAA---CA 6741 ||||| | | ||||||| || || || || | || | |||| | | ||| | || Sbjct 611 TACAAAGATCGACCAGATTTAAT--AGTTATAGAAGGAGACAGTA-TCACTAACAGCCCA 667 Query 6742 GATAATTTAGTTTGCTGGAATGGTCAAGCAGGGGGGTTAGAGGGACTGAGACAAAAAGGT 6801 | | || || || ||| | || ||||| || || | || || | | || |||||| Sbjct 668 GGGGAGTTTGTCTGTTGGCAAGGCCAAGCCGGTGGTTGCGAAGGCTTACGTCAGAAAGGT 727 Query 6802 TGGAGTATACTCAACT 6817 |||||| | |||||| Sbjct 728 TGGAGTCTGGTCAACT 743 >seq1814 Length=63972 Score = 123 bits (136), Expect = 2e-24 Identities = 334/496 (67%), Gaps = 19/496 (4%) Strand=Plus/Plus Query 6332 AAAGA-GAGCTGAAACAAGCAGGTAGATTCTTTTCATTGATGTCATGGGAGTTACGAGAG 6390 ||||| |||||||||| | ||| ||||| ||| | | ||| ||| | || || Sbjct 1663 AAAGAAGAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGAT 1722 Query 6391 TACTTTGTCATTACCGAATATTTAATAAAACACCATTTTGTACCTCTATTTAAGGGATTA 6450 ||||||||||| || || ||||| || || | |||||||| ||||| | || |||||| Sbjct 1723 TACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTA 1782 Query 6451 ACAATGGCAGATGA-TATGACAGAAGTGATCAAAAAGATGCTGGAAAGAAGTCA--AGGC 6507 |||||||| || || || ||| || |||| |||||| || || ||| || Sbjct 1783 ACAATGGCTGACGACTAGAACA-CCGTAGTCAACAAGATGATGCAA--GCTTCATCTGGA 1839 Query 6508 CAAGGAGAATTAGA-CTATCAACATGTGAGCATAGCGAACCATATAGATTATGAAAAGTG 6566 | || | | ||| ||| | | | || |||||| || ||| | |||||||| ||||| Sbjct 1840 C-AGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTG 1898 Query 6567 GAACAATCATCAAAGGAAAGAATCAAATGGACCAGTTTTCCGTGTGATGGGCCAATTCTT 6626 ||||||| ||||||| || ||||| || || ||| || ||||| | ||| || Sbjct 1899 GAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTT 1958 Query 6627 GGGCTATCCATCTTTGATAGAGAGAACGCATGAGTTCTTT-GAGA-AAAGTCTTGTTTAT 6684 || | || |||| | |||||| ||||| |||||| | || | ||| | ||| Sbjct 1959 TGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCT--TCTAT 2016 Query 6685 TACAATGGTAGACCAGACTTGATGAAGGTAGAAAATGGTGTAGTATTGAATAAAA---CA 6741 ||||| | | ||||||| || || || || | || | |||| | | ||| | || Sbjct 2017 TACAAAGATCGACCAGATTTAAT--AGTTATAGAAGGAGACAGTA-TCACTAACAGCCCA 2073 Query 6742 GATAATTTAGTTTGCTGGAATGGTCAAGCAGGGGGGTTAGAGGGACTGAGACAAAAAGGT 6801 | | || || || ||| | || ||||| || || | || || | | || |||||| Sbjct 2074 GGGGAGTTTGTCTGTTGGCAAGGCCAAGCCGGTGGTTGCGAAGGCTTACGTCAGAAAGGT 2133 Query 6802 TGGAGTATACTCAACT 6817 |||||| | |||||| Sbjct 2134 TGGAGTCTGGTCAACT 2149 >seq1440 Length=90230 Score = 123 bits (136), Expect = 2e-24 Identities = 334/496 (67%), Gaps = 19/496 (4%) Strand=Plus/Plus Query 6332 AAAGA-GAGCTGAAACAAGCAGGTAGATTCTTTTCATTGATGTCATGGGAGTTACGAGAG 6390 ||||| |||||||||| | ||| ||||| ||| | | ||| ||| | || || Sbjct 52001 AAAGAAGAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGAT 52060 Query 6391 TACTTTGTCATTACCGAATATTTAATAAAACACCATTTTGTACCTCTATTTAAGGGATTA 6450 ||||||||||| || || ||||| || || | |||||||| ||||| | || |||||| Sbjct 52061 TACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTA 52120 Query 6451 ACAATGGCAGATGA-TATGACAGAAGTGATCAAAAAGATGCTGGAAAGAAGTCAA--GGC 6507 |||||||| || || || ||| || |||| |||||| || || ||| || Sbjct 52121 ACAATGGCTGACGACTAGAACACC-GTAGTCAACAAGATGATGCAAGCT--TCATCTGGA 52177 Query 6508 CAAGGAGAATTAGACT-ATCAACATGTGAGCATAGCGAACCATATAGATTATGAAAAGTG 6566 || | | | | | | || | | |||| |||||| || ||| | |||||||| ||||| Sbjct 52178 CA-GACCACTCACAGTTATGATGAGGTGACCATAGCAAATCATGTTGATTATGAGAAGTG 52236 Query 6567 GAACAATCATCAAAGGAAAGAATCAAATGGACCAGTTTTCCGTGTGATGGGCCAATTCTT 6626 ||||||| ||||||| || ||||| || || ||| || ||||| | ||| || Sbjct 52237 GAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTT 52296 Query 6627 GGGCTATCCATCTTTGATAGAGAGAACGCATGAGTTCTTT-GAGA-AAAGTCTTGTTTAT 6684 || | || |||| | |||||| ||||| |||||| | || | ||| | ||| Sbjct 52297 TGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCT--TCTAT 52354 Query 6685 TACAATGGTAGACCAGACTTGATGAAGGTAGAAAATGGTGTAGTATTGAATAAAA---CA 6741 ||||| | | ||||||| || ||| | || | || | |||| | | ||| | || Sbjct 52355 TACAAAGATCGACCAGATTTAATG--GTTATAGAAGGAGACAGTA-TCACTAACAGCCCA 52411 Query 6742 GATAATTTAGTTTGCTGGAATGGTCAAGCAGGGGGGTTAGAGGGACTGAGACAAAAAGGT 6801 | | || || || ||| | || ||||| || || | || || | | || |||||| Sbjct 52412 GGGGAGTTTGTCTGTTGGCAAGGCCAAGCCGGTGGTTGCGAAGGCTTACGTCAGAAAGGT 52471 Query 6802 TGGAGTATACTCAACT 6817 |||||| | |||||| Sbjct 52472 TGGAGTCTGGTCAACT 52487 >seq2296 Length=40579 Score = 98.7 bits (108), Expect = 7e-17 Identities = 180/255 (71%), Gaps = 9/255 (4%) Strand=Plus/Plus Query 6332 AAAGA-GAGCTGAAACAAGCAGGTAGATTCTTTTCATTGATGTCATGGGAGTTACGAGAG 6390 ||||| |||||||||| | ||| ||||| ||| | | ||| ||| | || || Sbjct 1726 AAAGAAGAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGAT 1785 Query 6391 TACTTTGTCATTACCGAATATTTAATAAAACACCATTTTGTACCTCTATTTAAGGGATTA 6450 ||||||||||| || || ||||| || || | |||||||| ||||| | || |||||| Sbjct 1786 TACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTA 1845 Query 6451 ACAATGGCAGATGA-TATGACAGAAGTGATCAAAAAGATGCTGGAAAGAAGTCA--AGGC 6507 |||||||| || || || ||| || |||| |||||| || || ||| || Sbjct 1846 ACAATGGCTGACGACTACAACA-CCGTAGTCAACAAGATGATGCAA--GCTTCATCTGGA 1902 Query 6508 CAAGGAGAATTAGA-CTATCAACATGTGAGCATAGCGAACCATATAGATTATGAAAAGTG 6566 | || | | ||| ||| | | | || |||||| || ||| | |||||||| ||||| Sbjct 1903 C-AGACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTG 1961 Query 6567 GAACAATCATCAAAG 6581 ||||||| ||||||| Sbjct 1962 GAACAATTATCAAAG 1976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35515775129800