Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_028246.1
Length=14627
Score E
Sequences producing significant alignments: (Bits) Value
seq1440 131 2e-26
seq9517 120 3e-23
seq8251 120 3e-23
seq1814 120 3e-23
seq2296 91.5 1e-14
>seq1440
Length=90230
Score = 131 bits (144), Expect = 2e-26
Identities = 226/324 (70%), Gaps = 6/324 (2%)
Strand=Plus/Plus
Query 9834 GATTACTTCGTAATGACTGAATATTTGATaaaaaaaTATTATGTACCATTATTCAAAGGA 9893
|||||||| || || || || |||||||| || || ||| ||| || | | | ||||
Sbjct 52058 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 52117
Query 9894 TTGACCATGGCTGATGATCAAAATACAGTAGTAAAGAAAATGCTCAAAGTTTCTAAAGGT 9953
|| || |||||||| || | || || ||||| || || ||| | ||| ||| ||
Sbjct 52118 TTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 52177
Query 9954 CA-AGGGCTAACAGATTATAAAGAGATAACATTTGCTAATCACTTGGATTATGAGAAGTG 10012
|| | || |||| |||| | ||| | || | || ||||| | ||||||||||||||
Sbjct 52178 CAGACCACTCACAG-TTATGATGAGGTGACCATAGCAAATCATGTTGATTATGAGAAGTG 52236
Query 10013 GAATAATTATCAAAGGAGGGAATCAAACGGTCCGGTGTTCAGAGTAATGGGCCAGTTTTT 10072
||| ||||||||||| | || ||| | |||||| ||| ||| ||||| | |||||
Sbjct 52237 GAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTT 52296
Query 10073 AGGTCTACCTCACTTAATAGAAAGAACTCACGAGTTCTTT--GAAAATAGTCTAATTTAT 10130
|| ||||| | || | ||||| || || |||||| | | | ||| | |||
Sbjct 52297 TGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCT--TCTAT 52354
Query 10131 TACAATGGCCGACCTGATTTAATG 10154
||||| | ||||| |||||||||
Sbjct 52355 TACAAAGATCGACCAGATTTAATG 52378
>seq9517
Length=2557
Score = 120 bits (132), Expect = 3e-23
Identities = 223/323 (69%), Gaps = 6/323 (2%)
Strand=Plus/Plus
Query 9834 GATTACTTCGTAATGACTGAATATTTGATaaaaaaaTATTATGTACCATTATTCAAAGGA 9893
|||||||| || || || || |||||||| || || ||| ||| || | | | ||||
Sbjct 639 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 698
Query 9894 TTGACCATGGCTGATGATCAAAATACAGTAGTAAAGAAAATGCTCAAAGTTTCTAAAGGT 9953
|| || |||||||| || | || || ||||| || || ||| | ||| ||| ||
Sbjct 699 TTAACAATGGCTGACGACTACAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 758
Query 9954 CAAGGGCTAACAGA-TTATAAAGAGATAACATTTGCTAATCACTTGGATTATGAGAAGTG 10012
|| | | |||| |||| | ||| || | || ||||| | ||||||||||||||
Sbjct 759 CA-GACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTG 817
Query 10013 GAATAATTATCAAAGGAGGGAATCAAACGGTCCGGTGTTCAGAGTAATGGGCCAGTTTTT 10072
||| ||||||||||| | || ||| | |||||| ||| ||| ||||| | |||||
Sbjct 818 GAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTT 877
Query 10073 AGGTCTACCTCACTTAATAGAAAGAACTCACGAGTTCTTT--GAAAATAGTCTAATTTAT 10130
|| ||||| | || | ||||| || || |||||| | | | ||| | |||
Sbjct 878 TGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCT--TCTAT 935
Query 10131 TACAATGGCCGACCTGATTTAAT 10153
||||| | ||||| ||||||||
Sbjct 936 TACAAAGATCGACCAGATTTAAT 958
>seq8251
Length=2688
Score = 120 bits (132), Expect = 3e-23
Identities = 223/323 (69%), Gaps = 6/323 (2%)
Strand=Plus/Plus
Query 9834 GATTACTTCGTAATGACTGAATATTTGATaaaaaaaTATTATGTACCATTATTCAAAGGA 9893
|||||||| || || || || |||||||| || || ||| ||| || | | | ||||
Sbjct 314 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 373
Query 9894 TTGACCATGGCTGATGATCAAAATACAGTAGTAAAGAAAATGCTCAAAGTTTCTAAAGGT 9953
|| || |||||||| || | || || ||||| || || ||| | ||| ||| ||
Sbjct 374 TTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 433
Query 9954 CAAGGGCTAACAGA-TTATAAAGAGATAACATTTGCTAATCACTTGGATTATGAGAAGTG 10012
|| | | |||| |||| | ||| || | || ||||| | ||||||||||||||
Sbjct 434 CA-GACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTG 492
Query 10013 GAATAATTATCAAAGGAGGGAATCAAACGGTCCGGTGTTCAGAGTAATGGGCCAGTTTTT 10072
||| ||||||||||| | || ||| | |||||| ||| ||| ||||| | |||||
Sbjct 493 GAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTT 552
Query 10073 AGGTCTACCTCACTTAATAGAAAGAACTCACGAGTTCTTT--GAAAATAGTCTAATTTAT 10130
|| ||||| | || | ||||| || || |||||| | | | ||| | |||
Sbjct 553 TGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCT--TCTAT 610
Query 10131 TACAATGGCCGACCTGATTTAAT 10153
||||| | ||||| ||||||||
Sbjct 611 TACAAAGATCGACCAGATTTAAT 633
>seq1814
Length=63972
Score = 120 bits (132), Expect = 3e-23
Identities = 223/323 (69%), Gaps = 6/323 (2%)
Strand=Plus/Plus
Query 9834 GATTACTTCGTAATGACTGAATATTTGATaaaaaaaTATTATGTACCATTATTCAAAGGA 9893
|||||||| || || || || |||||||| || || ||| ||| || | | | ||||
Sbjct 1720 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 1779
Query 9894 TTGACCATGGCTGATGATCAAAATACAGTAGTAAAGAAAATGCTCAAAGTTTCTAAAGGT 9953
|| || |||||||| || | || || ||||| || || ||| | ||| ||| ||
Sbjct 1780 TTAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 1839
Query 9954 CAAGGGCTAACAGA-TTATAAAGAGATAACATTTGCTAATCACTTGGATTATGAGAAGTG 10012
|| | | |||| |||| | ||| || | || ||||| | ||||||||||||||
Sbjct 1840 CA-GACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTG 1898
Query 10013 GAATAATTATCAAAGGAGGGAATCAAACGGTCCGGTGTTCAGAGTAATGGGCCAGTTTTT 10072
||| ||||||||||| | || ||| | |||||| ||| ||| ||||| | |||||
Sbjct 1899 GAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTT 1958
Query 10073 AGGTCTACCTCACTTAATAGAAAGAACTCACGAGTTCTTT--GAAAATAGTCTAATTTAT 10130
|| ||||| | || | ||||| || || |||||| | | | ||| | |||
Sbjct 1959 TGGATTACCTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCT--TCTAT 2016
Query 10131 TACAATGGCCGACCTGATTTAAT 10153
||||| | ||||| ||||||||
Sbjct 2017 TACAAAGATCGACCAGATTTAAT 2039
>seq2296
Length=40579
Score = 91.5 bits (100), Expect = 1e-14
Identities = 154/219 (70%), Gaps = 7/219 (3%)
Strand=Plus/Plus
Query 9834 GATTACTTCGTAATGACTGAATATTTGATaaaaaaaTATTATGTACCATTATTCAAAGGA 9893
|||||||| || || || || |||||||| || || ||| ||| || | | | ||||
Sbjct 1783 GATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGA 1842
Query 9894 TTGACCATGGCTGATGATCAAAATACAGTAGTAAAGAAAATGCTCAAAGTTTCTAAAGGT 9953
|| || |||||||| || | || || ||||| || || ||| | ||| ||| ||
Sbjct 1843 TTAACAATGGCTGACGACTACAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGA 1902
Query 9954 CAAGGGCTAACAGA-TTATAAAGAGATAACATTTGCTAATCACTTGGATTATGAGAAGTG 10012
|| | | |||| |||| | ||| || | || ||||| | ||||||||||||||
Sbjct 1903 CA-GACCACTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTG 1961
Query 10013 GAATAATTATCAAAG----GAGGG-AATCAAACGGTCCG 10046
||| ||||||||||| ||||| ||||| ||| |||
Sbjct 1962 GAACAATTATCAAAGAGGTGAGGGAAATCATCCGGCCCG 2000
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 46660690000300
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |