Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_031236.1 Length=11165 Score E Sequences producing significant alignments: (Bits) Value seq8251 118 8e-23 seq1814 118 8e-23 seq9517 113 3e-21 seq1440 113 3e-21 >seq8251 Length=2688 Score = 118 bits (130), Expect = 8e-23 Identities = 324/493 (66%), Gaps = 34/493 (7%) Strand=Plus/Plus Query 6260 AAGAGAGGGAACTAAAAGCACAGGGAAGATTCTTCTCCCTGCTTTCTTGGGTACTTAGAG 6319 ||||| | ||||||||| ||||||| || | || | |||| ||| | | Sbjct 261 AAGAGCTGAAACTAAAAG------GAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTG 314 Query 6320 AGTATTTTGTCGTAACGGAATATCTTATAAAGATCCATTTCCTCCCTCTTTTTAAGGGAC 6379 | || |||||| ||||||| ||| | || |||| ||||| | ||||| | || ||| Sbjct 315 ATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGAT 374 Query 6380 TGACTATGGCTGATGACTTGACTACCCTCACCAAGAAGATGCTGGACACCTCCTCGGGTC 6439 | || |||||||| |||| || ||| | ||| |||||| || | | || || || | Sbjct 375 TAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGAC 434 Query 6440 A--------AGGGTTAAGTGGATACGACAAAATTAGTTATGCTAACCATTTGGATTATGA 6491 | || |||| | || |||| | | || || ||| | |||||||| Sbjct 435 AGACCACTCAGAGTTATGATGAGGCGACCATA--------GCAAATCATGTTGATTATGA 486 Query 6492 GAAGTGGAACAATTATCAAAGGATTGAGTCCAACGGACCGGTCTTCAAAGTCATGGGACA 6551 ||||||||||||||||||||| |||| || | ||||||||| ||||||||| | Sbjct 487 GAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCG 546 Query 6552 GTTTCTGGGGTATCCAAATCTTATATA-TCGAACACATGAGTTCTTCCAGAAAAGCATCA 6610 ||| | || | || ||| || | || |||||||||| ||||| | | | || Sbjct 547 ATTTTTTGGATTACCTAAT-TTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCT 605 Query 6611 TTTACTACAATGATAGGCCGGATTTGATGGTAGTAGAGAACGGGATGATAGT-----GAA 6665 | || ||||| ||| | || ||||| || || || |||| ||| || ||| || Sbjct 606 TCTATTACAAAGATCGACCAGATTTAATAGT--TATAGAA--GGA-GACAGTATCACTAA 660 Query 6666 TCGCACTGAAGAGAGAGTAGTGTGGAACGGACAAGCTGGGGGATTGGAAGGATTAAGGCA 6725 || | | ||| || ||| | || ||||| || || | ||||| ||| | || Sbjct 661 CAGCCCAGGGGAGTTTGTCTGTTGGCAAGGCCAAGCCGGTGGTTGCGAAGGCTTACGTCA 720 Query 6726 GAAAGGATGGAGT 6738 |||||| |||||| Sbjct 721 GAAAGGTTGGAGT 733 >seq1814 Length=63972 Score = 118 bits (130), Expect = 8e-23 Identities = 324/493 (66%), Gaps = 34/493 (7%) Strand=Plus/Plus Query 6260 AAGAGAGGGAACTAAAAGCACAGGGAAGATTCTTCTCCCTGCTTTCTTGGGTACTTAGAG 6319 ||||| | ||||||||| ||||||| || | || | |||| ||| | | Sbjct 1667 AAGAGCTGAAACTAAAAG------GAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTG 1720 Query 6320 AGTATTTTGTCGTAACGGAATATCTTATAAAGATCCATTTCCTCCCTCTTTTTAAGGGAC 6379 | || |||||| ||||||| ||| | || |||| ||||| | ||||| | || ||| Sbjct 1721 ATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGAT 1780 Query 6380 TGACTATGGCTGATGACTTGACTACCCTCACCAAGAAGATGCTGGACACCTCCTCGGGTC 6439 | || |||||||| |||| || ||| | ||| |||||| || | | || || || | Sbjct 1781 TAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGAC 1840 Query 6440 A--------AGGGTTAAGTGGATACGACAAAATTAGTTATGCTAACCATTTGGATTATGA 6491 | || |||| | || |||| | | || || ||| | |||||||| Sbjct 1841 AGACCACTCAGAGTTATGATGAGGCGACCATA--------GCAAATCATGTTGATTATGA 1892 Query 6492 GAAGTGGAACAATTATCAAAGGATTGAGTCCAACGGACCGGTCTTCAAAGTCATGGGACA 6551 ||||||||||||||||||||| |||| || | ||||||||| ||||||||| | Sbjct 1893 GAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCG 1952 Query 6552 GTTTCTGGGGTATCCAAATCTTATATA-TCGAACACATGAGTTCTTCCAGAAAAGCATCA 6610 ||| | || | || ||| || | || |||||||||| ||||| | | | || Sbjct 1953 ATTTTTTGGATTACCTAAT-TTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCT 2011 Query 6611 TTTACTACAATGATAGGCCGGATTTGATGGTAGTAGAGAACGGGATGATAGT-----GAA 6665 | || ||||| ||| | || ||||| || || || |||| ||| || ||| || Sbjct 2012 TCTATTACAAAGATCGACCAGATTTAATAGT--TATAGAA--GGA-GACAGTATCACTAA 2066 Query 6666 TCGCACTGAAGAGAGAGTAGTGTGGAACGGACAAGCTGGGGGATTGGAAGGATTAAGGCA 6725 || | | ||| || ||| | || ||||| || || | ||||| ||| | || Sbjct 2067 CAGCCCAGGGGAGTTTGTCTGTTGGCAAGGCCAAGCCGGTGGTTGCGAAGGCTTACGTCA 2126 Query 6726 GAAAGGATGGAGT 6738 |||||| |||||| Sbjct 2127 GAAAGGTTGGAGT 2139 >seq9517 Length=2557 Score = 113 bits (124), Expect = 3e-21 Identities = 323/493 (66%), Gaps = 34/493 (7%) Strand=Plus/Plus Query 6260 AAGAGAGGGAACTAAAAGCACAGGGAAGATTCTTCTCCCTGCTTTCTTGGGTACTTAGAG 6319 ||||| | ||||||||| ||||||| || | || | |||| ||| | | Sbjct 586 AAGAGCTGAAACTAAAAG------GAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTG 639 Query 6320 AGTATTTTGTCGTAACGGAATATCTTATAAAGATCCATTTCCTCCCTCTTTTTAAGGGAC 6379 | || |||||| ||||||| ||| | || |||| ||||| | ||||| | || ||| Sbjct 640 ATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGAT 699 Query 6380 TGACTATGGCTGATGACTTGACTACCCTCACCAAGAAGATGCTGGACACCTCCTCGGGTC 6439 | || |||||||| |||| | ||| | ||| |||||| || | | || || || | Sbjct 700 TAACAATGGCTGACGACTACAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGAC 759 Query 6440 A--------AGGGTTAAGTGGATACGACAAAATTAGTTATGCTAACCATTTGGATTATGA 6491 | || |||| | || |||| | | || || ||| | |||||||| Sbjct 760 AGACCACTCAGAGTTATGATGAGGCGACCATA--------GCAAATCATGTTGATTATGA 811 Query 6492 GAAGTGGAACAATTATCAAAGGATTGAGTCCAACGGACCGGTCTTCAAAGTCATGGGACA 6551 ||||||||||||||||||||| |||| || | ||||||||| ||||||||| | Sbjct 812 GAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCG 871 Query 6552 GTTTCTGGGGTATCCAAATCTTATATA-TCGAACACATGAGTTCTTCCAGAAAAGCATCA 6610 ||| | || | || ||| || | || |||||||||| ||||| | | | || Sbjct 872 ATTTTTTGGATTACCTAAT-TTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCT 930 Query 6611 TTTACTACAATGATAGGCCGGATTTGATGGTAGTAGAGAACGGGATGATAGT-----GAA 6665 | || ||||| ||| | || ||||| || || || |||| ||| || ||| || Sbjct 931 TCTATTACAAAGATCGACCAGATTTAATAGT--TATAGAA--GGA-GACAGTATCACTAA 985 Query 6666 TCGCACTGAAGAGAGAGTAGTGTGGAACGGACAAGCTGGGGGATTGGAAGGATTAAGGCA 6725 || | | ||| || ||| | || ||||| || || | ||||| ||| | || Sbjct 986 CAGCCCAGGGGAGTTTGTCTGTTGGCAAGGCCAAGCCGGTGGTTGCGAAGGCTTACGTCA 1045 Query 6726 GAAAGGATGGAGT 6738 |||||| |||||| Sbjct 1046 GAAAGGTTGGAGT 1058 >seq1440 Length=90230 Score = 113 bits (124), Expect = 3e-21 Identities = 323/493 (66%), Gaps = 34/493 (7%) Strand=Plus/Plus Query 6260 AAGAGAGGGAACTAAAAGCACAGGGAAGATTCTTCTCCCTGCTTTCTTGGGTACTTAGAG 6319 ||||| | ||||||||| ||||||| || | || | |||| ||| | | Sbjct 52005 AAGAGCTGAAACTAAAAG------GAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTG 52058 Query 6320 AGTATTTTGTCGTAACGGAATATCTTATAAAGATCCATTTCCTCCCTCTTTTTAAGGGAC 6379 | || |||||| ||||||| ||| | || |||| ||||| | ||||| | || ||| Sbjct 52059 ATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGAT 52118 Query 6380 TGACTATGGCTGATGACTTGACTACCCTCACCAAGAAGATGCTGGACACCTCCTCGGGTC 6439 | || |||||||| |||| || ||| | ||| |||||| || | | || || || | Sbjct 52119 TAACAATGGCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGAC 52178 Query 6440 A--------AGGGTTAAGTGGATACGACAAAATTAGTTATGCTAACCATTTGGATTATGA 6491 | | |||| | || ||| | | || || ||| | |||||||| Sbjct 52179 AGACCACTCACAGTTATGATGAGGTGACCATA--------GCAAATCATGTTGATTATGA 52230 Query 6492 GAAGTGGAACAATTATCAAAGGATTGAGTCCAACGGACCGGTCTTCAAAGTCATGGGACA 6551 ||||||||||||||||||||| |||| || | ||||||||| ||||||||| | Sbjct 52231 GAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCG 52290 Query 6552 GTTTCTGGGGTATCCAAATCTTATATA-TCGAACACATGAGTTCTTCCAGAAAAGCATCA 6610 ||| | || | || ||| || | || |||||||||| ||||| | | | || Sbjct 52291 ATTTTTTGGATTACCTAAT-TTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCT 52349 Query 6611 TTTACTACAATGATAGGCCGGATTTGATGGTAGTAGAGAACGGGATGATAGT-----GAA 6665 | || ||||| ||| | || ||||| ||||| || |||| ||| || ||| || Sbjct 52350 TCTATTACAAAGATCGACCAGATTTAATGGT--TATAGAA--GGA-GACAGTATCACTAA 52404 Query 6666 TCGCACTGAAGAGAGAGTAGTGTGGAACGGACAAGCTGGGGGATTGGAAGGATTAAGGCA 6725 || | | ||| || ||| | || ||||| || || | ||||| ||| | || Sbjct 52405 CAGCCCAGGGGAGTTTGTCTGTTGGCAAGGCCAAGCCGGTGGTTGCGAAGGCTTACGTCA 52464 Query 6726 GAAAGGATGGAGT 6738 |||||| |||||| Sbjct 52465 GAAAGGTTGGAGT 52477 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35592531420040