Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_031240.1
Length=11541
Score E
Sequences producing significant alignments: (Bits) Value
seq1440 150 1e-32
seq9517 145 6e-31
seq8251 145 6e-31
seq1814 145 6e-31
seq2296 114 1e-21
>seq1440
Length=90230
Score = 150 bits (166), Expect = 1e-32
Identities = 268/386 (69%), Gaps = 9/386 (2%)
Strand=Plus/Plus
Query 6440 TTAGTGATTGGTTTAAAAGAGAAAGAAAGAGAGTTGAAGATAGGAGGAAGATTTTTCGCT 6499
|||||||| ||| | | || |||||| ||| |||| || |||||||||||| |||
Sbjct 51980 TTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCT 52036
Query 6500 TTAATGTCTTGGGAGATTAGAGATTATTTTGTAATGACAGAATATTTAATTAAAACTCAT 6559
| ||| |||| || | ||||| ||||| || || || ||||| ||||| | |||
Sbjct 52037 CTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCAT 52096
Query 6560 TTTGTGCCTCTCTTTGACGGATTAACAATGGCTGATGATCTA-ACAACTGTTATCGGAAA 6618
||||| ||||||| | ||||||||||||||||| || ||| | || || || ||
Sbjct 52097 TTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGA-CTAGAACACCGTAGTCAACAA 52155
Query 6619 GATTTTGCGAAACACTGAAGGACAAGGAGAA--GATGGATATGAAAGTGTCACCTTCGCA 6676
||| ||| | | ||||| || | | | ||||| || ||| | |||
Sbjct 52156 GATGATGCAAGCTTCATCTGGACA--GACCACTCACAGTTATGATGAGGTGACCATAGCA 52213
Query 6677 GATCATATAGATTACGAAAAATGGAACAATCATCAGAGAGGAGAGGCAAATAATCCAACT 6736
||||| | ||||| || || ||||||||| |||| ||||| |||| |||| ||||
Sbjct 52214 AATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTC 52273
Query 6737 TTCAAAGTTATGGGACAATTTTTAGGATACCCCAATTTAATTCAGAGAACTCATGAAATA 6796
||| ||| ||||| | |||||| |||| || ||||| || |||||| |||||| |
Sbjct 52274 TTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTC 52333
Query 6797 TTTGAGAAATCATGGATATATTATAA 6822
||| | | |||| | ||||| ||
Sbjct 52334 TTTCGGGATTCATTCTTCTATTACAA 52359
>seq9517
Length=2557
Score = 145 bits (160), Expect = 6e-31
Identities = 267/386 (69%), Gaps = 9/386 (2%)
Strand=Plus/Plus
Query 6440 TTAGTGATTGGTTTAAAAGAGAAAGAAAGAGAGTTGAAGATAGGAGGAAGATTTTTCGCT 6499
|||||||| ||| | | || |||||| ||| |||| || |||||||||||| |||
Sbjct 561 TTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCT 617
Query 6500 TTAATGTCTTGGGAGATTAGAGATTATTTTGTAATGACAGAATATTTAATTAAAACTCAT 6559
| ||| |||| || | ||||| ||||| || || || ||||| ||||| | |||
Sbjct 618 CTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCAT 677
Query 6560 TTTGTGCCTCTCTTTGACGGATTAACAATGGCTGATGATCTA-ACAACTGTTATCGGAAA 6618
||||| ||||||| | ||||||||||||||||| || ||| | || || || ||
Sbjct 678 TTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGA-CTACAACACCGTAGTCAACAA 736
Query 6619 GATTTTGCGAAACACTGAAGGACAAGGAGAA--GATGGATATGAAAGTGTCACCTTCGCA 6676
||| ||| | | ||||| || | | | ||||| | ||| | |||
Sbjct 737 GATGATGCAAGCTTCATCTGGACA--GACCACTCAGAGTTATGATGAGGCGACCATAGCA 794
Query 6677 GATCATATAGATTACGAAAAATGGAACAATCATCAGAGAGGAGAGGCAAATAATCCAACT 6736
||||| | ||||| || || ||||||||| |||| ||||| |||| |||| ||||
Sbjct 795 AATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTC 854
Query 6737 TTCAAAGTTATGGGACAATTTTTAGGATACCCCAATTTAATTCAGAGAACTCATGAAATA 6796
||| ||| ||||| | |||||| |||| || ||||| || |||||| |||||| |
Sbjct 855 TTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTC 914
Query 6797 TTTGAGAAATCATGGATATATTATAA 6822
||| | | |||| | ||||| ||
Sbjct 915 TTTCGGGATTCATTCTTCTATTACAA 940
>seq8251
Length=2688
Score = 145 bits (160), Expect = 6e-31
Identities = 267/386 (69%), Gaps = 9/386 (2%)
Strand=Plus/Plus
Query 6440 TTAGTGATTGGTTTAAAAGAGAAAGAAAGAGAGTTGAAGATAGGAGGAAGATTTTTCGCT 6499
|||||||| ||| | | || |||||| ||| |||| || |||||||||||| |||
Sbjct 236 TTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCT 292
Query 6500 TTAATGTCTTGGGAGATTAGAGATTATTTTGTAATGACAGAATATTTAATTAAAACTCAT 6559
| ||| |||| || | ||||| ||||| || || || ||||| ||||| | |||
Sbjct 293 CTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCAT 352
Query 6560 TTTGTGCCTCTCTTTGACGGATTAACAATGGCTGATGATCTA-ACAACTGTTATCGGAAA 6618
||||| ||||||| | ||||||||||||||||| || ||| | || || || ||
Sbjct 353 TTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGA-CTAGAACACCGTAGTCAACAA 411
Query 6619 GATTTTGCGAAACACTGAAGGACAAGGAGAA--GATGGATATGAAAGTGTCACCTTCGCA 6676
||| ||| | | ||||| || | | | ||||| | ||| | |||
Sbjct 412 GATGATGCAAGCTTCATCTGGACA--GACCACTCAGAGTTATGATGAGGCGACCATAGCA 469
Query 6677 GATCATATAGATTACGAAAAATGGAACAATCATCAGAGAGGAGAGGCAAATAATCCAACT 6736
||||| | ||||| || || ||||||||| |||| ||||| |||| |||| ||||
Sbjct 470 AATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTC 529
Query 6737 TTCAAAGTTATGGGACAATTTTTAGGATACCCCAATTTAATTCAGAGAACTCATGAAATA 6796
||| ||| ||||| | |||||| |||| || ||||| || |||||| |||||| |
Sbjct 530 TTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTC 589
Query 6797 TTTGAGAAATCATGGATATATTATAA 6822
||| | | |||| | ||||| ||
Sbjct 590 TTTCGGGATTCATTCTTCTATTACAA 615
>seq1814
Length=63972
Score = 145 bits (160), Expect = 6e-31
Identities = 267/386 (69%), Gaps = 9/386 (2%)
Strand=Plus/Plus
Query 6440 TTAGTGATTGGTTTAAAAGAGAAAGAAAGAGAGTTGAAGATAGGAGGAAGATTTTTCGCT 6499
|||||||| ||| | | || |||||| ||| |||| || |||||||||||| |||
Sbjct 1642 TTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCT 1698
Query 6500 TTAATGTCTTGGGAGATTAGAGATTATTTTGTAATGACAGAATATTTAATTAAAACTCAT 6559
| ||| |||| || | ||||| ||||| || || || ||||| ||||| | |||
Sbjct 1699 CTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCAT 1758
Query 6560 TTTGTGCCTCTCTTTGACGGATTAACAATGGCTGATGATCTA-ACAACTGTTATCGGAAA 6618
||||| ||||||| | ||||||||||||||||| || ||| | || || || ||
Sbjct 1759 TTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGA-CTAGAACACCGTAGTCAACAA 1817
Query 6619 GATTTTGCGAAACACTGAAGGACAAGGAGAA--GATGGATATGAAAGTGTCACCTTCGCA 6676
||| ||| | | ||||| || | | | ||||| | ||| | |||
Sbjct 1818 GATGATGCAAGCTTCATCTGGACA--GACCACTCAGAGTTATGATGAGGCGACCATAGCA 1875
Query 6677 GATCATATAGATTACGAAAAATGGAACAATCATCAGAGAGGAGAGGCAAATAATCCAACT 6736
||||| | ||||| || || ||||||||| |||| ||||| |||| |||| ||||
Sbjct 1876 AATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATGATCCGGTC 1935
Query 6737 TTCAAAGTTATGGGACAATTTTTAGGATACCCCAATTTAATTCAGAGAACTCATGAAATA 6796
||| ||| ||||| | |||||| |||| || ||||| || |||||| |||||| |
Sbjct 1936 TTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACACATGAATTC 1995
Query 6797 TTTGAGAAATCATGGATATATTATAA 6822
||| | | |||| | ||||| ||
Sbjct 1996 TTTCGGGATTCATTCTTCTATTACAA 2021
>seq2296
Length=40579
Score = 114 bits (126), Expect = 1e-21
Identities = 206/296 (70%), Gaps = 9/296 (3%)
Strand=Plus/Plus
Query 6440 TTAGTGATTGGTTTAAAAGAGAAAGAAAGAGAGTTGAAGATAGGAGGAAGATTTTTCGCT 6499
|||||||| ||| | | || |||||| ||| |||| || |||||||||||| |||
Sbjct 1705 TTAGTGATCGGTCTGAGAGCAAAAGAA---GAGCTGAAACTAAAAGGAAGATTTTTTGCT 1761
Query 6500 TTAATGTCTTGGGAGATTAGAGATTATTTTGTAATGACAGAATATTTAATTAAAACTCAT 6559
| ||| |||| || | ||||| ||||| || || || ||||| ||||| | |||
Sbjct 1762 CTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGATTAAGAAGCAT 1821
Query 6560 TTTGTGCCTCTCTTTGACGGATTAACAATGGCTGATGATCTA-ACAACTGTTATCGGAAA 6618
||||| ||||||| | ||||||||||||||||| || ||| | || || || ||
Sbjct 1822 TTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGA-CTACAACACCGTAGTCAACAA 1880
Query 6619 GATTTTGCGAAACACTGAAGGACAAGGAGAA--GATGGATATGAAAGTGTCACCTTCGCA 6676
||| ||| | | ||||| || | | | ||||| | ||| | |||
Sbjct 1881 GATGATGCAAGCTTCATCTGGACA--GACCACTCAGAGTTATGATGAGGCGACCATAGCA 1938
Query 6677 GATCATATAGATTACGAAAAATGGAACAATCATCAGAGAGGAGAGGCAAATAATCC 6732
||||| | ||||| || || ||||||||| |||| ||||| |||| |||| ||||
Sbjct 1939 AATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATCATCC 1994
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36795046633800
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |