Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_031244.1
Length=12774
Score E
Sequences producing significant alignments: (Bits) Value
seq13 381 5e-102
seq1238 370 9e-99
>seq13
Length=835404
Score = 381 bits (422), Expect = 5e-102
Identities = 652/943 (69%), Gaps = 46/943 (5%)
Strand=Plus/Minus
Query 7721 ACGGAATCTACAGACAAGAGGATCATATCATTATCCAATGCGGTAAAGAATTAGAACTAA 7780
|||| | |||| ||||| || || || | | | || ||||| || |||||||| || |
Sbjct 457296 ACGGGGTATACAACCAAGAAGACCACATAAATGTGCAGTGCGGAAAGGAATTAGAGCTTA 457237
Query 7781 AGGAATCATCAGGGAGAGCATTCACAAAACAGACAAGCAATCAGAGATATATCCAAGTGT 7840
||||| |||||||| ||||| |||||||| ||||| |||||| ||||| | || ||
Sbjct 457236 AGGAAGATTCAGGGAGGGCATTTACAAAACAAACAAGTAATCAGCGATATTTTCAGGTTG 457177
Query 7841 CGCTTGAGCAAGGAATAGCCACAACTATATTTCCCTTCGTGCCTGAACAATCTATGACTG 7900
| || || ||| || || | || || || || || ||||||||||| ||||| |
Sbjct 457176 CCCTAGAACAACATATTGCTGAACACATCTTCCCTTTGGTTCCTGAACAATCGATGACCG 457117
Query 7901 ATTCTGAGATATCAATAATAAACAGACATATGGCTCATGTGTACTCTTTAGGAGGGACAT 7960
||||||| ||| |||| ||| ||| || || || || |||
Sbjct 457116 ATTCTGAAATAGCAATCATA---------------CAT------TCCTTGGGTGGATCAT 457078
Query 7961 CTGTGCTAATAAACATTGACCTCACAAAATGGTGTCTTCGACAAAGAGTTAATAATACAA 8020
| || | || || || || | ||||||||||||||||| ||||||| | ||||| |
Sbjct 457077 CAGTAGTCATCAAAATAAACTTAACAAAATGGTGTCTTCGCCAAAGAGCAATAAATACTA 457018
Query 8021 GCTTTGGCGGGAAAATATATGACGAACTATTTGGACTCAAAGGAATATACGAGAATAGTC 8080
||||||||||||| || |||||||| ||||| | | || || | || ||| ||||||
Sbjct 457017 GCTTTGGCGGGAAGATTTATGACGAGCTATTCGAGTTAAATGGTACGTATGAGGATAGTC 456958
Query 8081 ATCATTTCTTTTACAAAGTGCCTGCAGCCTGCAACTCGAGATTCTCACCTCCAGATTATG 8140
|| | |||||||| |||| | | |||||| || ||||| |||||||||||||
Sbjct 456957 ATAACTTCTTTTATCAAGTTTGAACTGTCTGCAATTCTAGATTTAGTCCTCCAGATTATG 456898
Query 8141 ATGAGAATGGTGAACCTATCCCTGGACCATTCTACATGGACAATTTTATTGGCGGTTGTG 8200
||||||| || | ||| | || || | |||||| |||| || || || || || ||||
Sbjct 456897 ATGAGAAGGGAAACCCTTTACCAGGGCTATTCTATATGGCAAACTTCATAGGAGGGTGTG 456838
Query 8201 AGGGAATGAAGCAGAAGGCTTGGACTCATATCACTTCTTCTGTACTCTTGCTGGCTCTGG 8260
| | |||||| || ||| ||||||| || || || ||| |||| || | | || |||
Sbjct 456837 AAGAAATGAAACAAAAGTCTTGGACACACATTACATCTGCTGTTCTTAAGTTATCTATGG 456778
Query 8261 AGGATCTTCATATGTCAGGGAATGTCATGGGTCAGGGTGACAATCAGATTGTCATACTGC 8320
|||||||| | || |||||||| ||| || || || |||||||||||||| || || |
Sbjct 456777 AGGATCTTGAATTGAGAGGGAATGCCATAGGGCAAGGAGACAATCAGATTGTAATTCTAC 456718
Query 8321 ATGTAAAGAAATCGGACAACGCAG-----GTGAG-ATCACAAGAAAATTCATTCAGACTA 8374
|| | | | ||| |||| || || || || || |||| ||||| | ||
Sbjct 456717 ATCT---GTCA-CGG--AACGAAGATATTGTCAGCATTACGAGAAGGTTCATCAACCATA 456664
Query 8375 TTA--TCGAGATGTTTGATAGCATCAACCATAAAGTAAAACCTAGAGAGACTTGGTTTTC 8432
||| || || ||| | || || ||||| || ||||| ||||| |||||||| ||
Sbjct 456663 TTACGTCTCTAT-TTTCACAG-ATTAACCACCGTGTCAAACCAAGAGAAACTTGGTTCTC 456606
Query 8433 TCATCATCTCCACGAGTATGGAAAGACAAGAATATGGAAAGGCTGTGCCGTTCCGTCAGG 8492
| || |||||||| ||||| || || || |||||||| ||||| ||||| ||
Sbjct 456605 AAAAATACTTCACGAGTACGGAAAAACTAGGATCTGGAAAGGATGTGCTGTTCCTAGTGG 456546
Query 8493 GACAAAGAAAGCTGCTAGATTTATCCCTGATGTAAATGACGGTCTGTTCTCCATTCACTC 8552
|| ||||| || | | | | || || ||| ||||||| || |||||||||| ||
Sbjct 456545 TACCAAGAATGCATCAAAAATGATTCCCGATATAAATGATGGATTGTTCTCCATAACATC 456486
Query 8553 TTGCATGTCTACAATAAATACTATCTCTGAATCAATAGCAAAGGCATCCTGGACTCCAGA 8612
| |||||||| || ||||| || |||| | | || ||||| || ||
Sbjct 456485 CAGTATGTCTACTATCAATACCATAACTGACGC---------TTCCTCTTGGACACCGGA 456435
Query 8613 CATCGCTTTCATAATGAATCAAATGGCGCAGGGTAACTTCATA 8655
| |||||||| | ||||||||||| || | ||| | ||||
Sbjct 456434 TGTTGCTTTCATTTTAAATCAAATGGCACAAGCTAATTACATA 456392
>seq1238
Length=108287
Score = 370 bits (410), Expect = 9e-99
Identities = 445/605 (74%), Gaps = 0/605 (0%)
Strand=Plus/Plus
Query 7721 ACGGAATCTACAGACAAGAGGATCATATCATTATCCAATGCGGTAAAGAATTAGAACTAA 7780
|||| | |||| ||||| || || || | | | || ||||| || |||||||| || |
Sbjct 94117 ACGGGGTATACAACCAAGAAGACCACATAAATGTGCAGTGCGGAAAGGAATTAGAGCTTA 94176
Query 7781 AGGAATCATCAGGGAGAGCATTCACAAAACAGACAAGCAATCAGAGATATATCCAAGTGT 7840
||||| |||||||| ||||| |||||||| ||||| |||||| ||||| | || ||
Sbjct 94177 AGGAAGATTCAGGGAGGGCATTTACAAAACAAACAAGTAATCAGCGATATTTTCAGGTTG 94236
Query 7841 CGCTTGAGCAAGGAATAGCCACAACTATATTTCCCTTCGTGCCTGAACAATCTATGACTG 7900
| || || ||| || || | || || || || || ||||||||||| ||||| |
Sbjct 94237 CCCTAGAACAACATATTGCTGAACACATCTTCCCTTTGGTTCCTGAACAATCGATGACCG 94296
Query 7901 ATTCTGAGATATCAATAATAAACAGACATATGGCTCATGTGTACTCTTTAGGAGGGACAT 7960
||||||| ||| |||| || |||||||||||| ||||| | | || || || || |||
Sbjct 94297 ATTCTGAAATAGCAATCATCAACAGACATATGTCTCATATACATTCCTTGGGTGGATCAT 94356
Query 7961 CTGTGCTAATAAACATTGACCTCACAAAATGGTGTCTTCGACAAAGAGTTAATAATACAA 8020
| || | || ||||| ||| | ||||||||||||||||| |||||| | || || |
Sbjct 94357 CAGTAGTCATCAACATAGACTTAACAAAATGGTGTCTTCGCTAAAGAGCAATAAAGACTA 94416
Query 8021 GCTTTGGCGGGAAAATATATGACGAACTATTTGGACTCAAAGGAATATACGAGAATAGTC 8080
||||||||||||| || |||||||| ||||| | | || || | || ||| ||||||
Sbjct 94417 GCTTTGGCGGGAAGATTTATGACGAGCTATTCGAGTTAAATGGTACGTATGAGGATAGTC 94476
Query 8081 ATCATTTCTTTTACAAAGTGCCTGCAGCCTGCAACTCGAGATTCTCACCTCCAGATTATG 8140
|| | |||||||| |||| | | |||||| || ||||| |||||||||||||
Sbjct 94477 ATAACTTCTTTTATCAAGTTTGAACTGTCTGCAATTCTAGATTTAGTCCTCCAGATTATG 94536
Query 8141 ATGAGAATGGTGAACCTATCCCTGGACCATTCTACATGGACAATTTTATTGGCGGTTGTG 8200
||||||| || | ||| | || || | |||||| |||| || || || || || ||||
Sbjct 94537 ATGAGAAGGGAAACCCTTTACCAGGGCTATTCTATATGGCAAACTTCATAGGAGGGTGTG 94596
Query 8201 AGGGAATGAAGCAGAAGGCTTGGACTCATATCACTTCTTCTGTACTCTTGCTGGCTCTGG 8260
| |||||||| || ||||||||||| || || || ||| |||| || | | || |||
Sbjct 94597 AAGGAATGAAACAAAAGGCTTGGACACACATTACATCTACTGTTCTTAAGTTATCTATGG 94656
Query 8261 AGGATCTTCATATGTCAGGGAATGTCATGGGTCAGGGTGACAATCAGATTGTCATACTGC 8320
|||||||| | || || | ||||||||| || || | |||||||||||| || || |
Sbjct 94657 AGGATCTTGAATTGAGGGGAACTGTCATGGGGCAAGGAGGCAATCAGATTGTAATTCTAC 94716
Query 8321 ATGTA 8325
|| ||
Sbjct 94717 ATCTA 94721
Score = 311 bits (344), Expect = 7e-81
Identities = 500/714 (70%), Gaps = 21/714 (3%)
Strand=Plus/Plus
Query 7945 TCTTTAGGAGGGACATCTGTGCTAATAAACATTGACCTCACAAAATGGTGTCTTCGACAA 8004
|| || || || |||| || | || || || || | ||||||||||||||||| |||
Sbjct 94844 TCCTTGGGTGGATCATCAGTAGTCATCAAAATAAACTTAACAAAATGGTGTCTTCGCCAA 94903
Query 8005 AGAGTTAATAATACAAGCTTTGGCGGGAAAATATATGACGAACTATTTGGACTCAAAGGA 8064
|||| | ||||| |||||||||||||| || |||||||| ||||| | | || ||
Sbjct 94904 AGAGCAATAAATACTAGCTTTGGCGGGAAGATTTATGACGAGCTATTCGAGTTAAATGGT 94963
Query 8065 ATATACGAGAATAGTCATCATTTCTTTTACAAAGTGCCTGCAGCCTGCAACTCGAGATTC 8124
| || ||| |||||||| | |||||||| |||| | | |||||| || |||||
Sbjct 94964 ACGTATGAGGATAGTCATAACTTCTTTTATCAAGTTTGAACTGTCTGCAATTCTAGATTT 95023
Query 8125 TCACCTCCAGATTATGATGAGAATGGTGAACCTATCCCTGGACCATTCTACATGGACAAT 8184
|||||||||||||||||||| || | ||| | || || |||||||| |||| ||
Sbjct 95024 AGTCCTCCAGATTATGATGAGAAGGGAAACCCTTTACCAGGGCCATTCTATATGGCAAAC 95083
Query 8185 TTTATTGGCGGTTGTGAGGGAATGAAGCAGAAGGCTTGGACTCATATCACTTCTTCTGTA 8244
|| || || || ||||| |||||||| || ||||||||||| || || || ||| ||||
Sbjct 95084 TTCATAGGAGGGTGTGAAGGAATGAAACAAAAGGCTTGGACACACATTACATCTACTGTT 95143
Query 8245 CTCTTGCTGGCTCTGGAGGATCTTCATATGTCAGGGAATGTCATGGGTCAGGGTGACAAT 8304
|| | | || ||||||||||| | || || | ||||||||| || || | ||||
Sbjct 95144 CTTAAGTTATCTATGGAGGATCTTGAATTGAGGGGAACTGTCATGGGGCAAGGAGGCAAT 95203
Query 8305 CAGATTGTCATACTGCATGTAAAGAAATCGGACAACG-CAGGTGAGATCACAAGAAAATT 8363
|||||||| || || ||| || | | || | | ||| || || |||| ||
Sbjct 95204 CAGATTGTAATTCTACATCTA---TCACCTGATATTGTCAG----CATTACGAGAAGGTT 95256
Query 8364 CATTCAGACTATTA--TCGAGATGTTTGATAGCATCAACCATAAAGTAAAACCTAGAGAG 8421
||| | ||||| || || ||| | || || || ||| || ||||| |||||
Sbjct 95257 CATCAACCATATTACGTCTCTAT-TTTCACAG-ATTAATCATTGTGTCAAACCAAGAGAA 95314
Query 8422 ACTTGGTTTTCTCATCATCTCCACGAGTATGGAAAGACAAGAATATGGAAAGGCTGTGCC 8481
||||| | || | || |||||||| ||||| || || || |||||||| |||||
Sbjct 95315 ACTTGATACTCAAAAATACTTCACGAGTACGGAAAAACTAGGATCTGGAAAGGATGTGCT 95374
Query 8482 GTTCCGTCAGGGACAAAGAAAGCTGCTAGATTTATCCCTGATGTAAATGACGGTCTGTTC 8541
||||| || || ||||| || | | | | || || ||| ||||||| || |||||
Sbjct 95375 GTTCCTAGTGGTACCAAGAAGGCATCAAAAATGATTCCCGATATAAATGATGGATTGTTC 95434
Query 8542 TCCATTCACTCTTGCATGTCTACAATAAATACTATCTCTGAATCAATAGCAAAGGCATCC 8601
||||| | |||||| || ||||| || |||| ||||||| | | | ||
Sbjct 95435 TCCAT---------AACGTCTACTATCAATACCATAACTGACGCAATAGCCAGGACCTCT 95485
Query 8602 TGGACTCCAGACATCGCTTTCATAATGAATCAAATGGCGCAGGGTAACTTCATA 8655
||||| || || | |||||||| | ||||||||||| || | ||| | ||||
Sbjct 95486 TGGACACCGGATGTTGCTTTCATTTTAAATCAAATGGCACAAGCTAATTACATA 95539
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40738401044880
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |