Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_031244.1 Length=12774 Score E Sequences producing significant alignments: (Bits) Value seq13 381 5e-102 seq1238 370 9e-99 >seq13 Length=835404 Score = 381 bits (422), Expect = 5e-102 Identities = 652/943 (69%), Gaps = 46/943 (5%) Strand=Plus/Minus Query 7721 ACGGAATCTACAGACAAGAGGATCATATCATTATCCAATGCGGTAAAGAATTAGAACTAA 7780 |||| | |||| ||||| || || || | | | || ||||| || |||||||| || | Sbjct 457296 ACGGGGTATACAACCAAGAAGACCACATAAATGTGCAGTGCGGAAAGGAATTAGAGCTTA 457237 Query 7781 AGGAATCATCAGGGAGAGCATTCACAAAACAGACAAGCAATCAGAGATATATCCAAGTGT 7840 ||||| |||||||| ||||| |||||||| ||||| |||||| ||||| | || || Sbjct 457236 AGGAAGATTCAGGGAGGGCATTTACAAAACAAACAAGTAATCAGCGATATTTTCAGGTTG 457177 Query 7841 CGCTTGAGCAAGGAATAGCCACAACTATATTTCCCTTCGTGCCTGAACAATCTATGACTG 7900 | || || ||| || || | || || || || || ||||||||||| ||||| | Sbjct 457176 CCCTAGAACAACATATTGCTGAACACATCTTCCCTTTGGTTCCTGAACAATCGATGACCG 457117 Query 7901 ATTCTGAGATATCAATAATAAACAGACATATGGCTCATGTGTACTCTTTAGGAGGGACAT 7960 ||||||| ||| |||| ||| ||| || || || || ||| Sbjct 457116 ATTCTGAAATAGCAATCATA---------------CAT------TCCTTGGGTGGATCAT 457078 Query 7961 CTGTGCTAATAAACATTGACCTCACAAAATGGTGTCTTCGACAAAGAGTTAATAATACAA 8020 | || | || || || || | ||||||||||||||||| ||||||| | ||||| | Sbjct 457077 CAGTAGTCATCAAAATAAACTTAACAAAATGGTGTCTTCGCCAAAGAGCAATAAATACTA 457018 Query 8021 GCTTTGGCGGGAAAATATATGACGAACTATTTGGACTCAAAGGAATATACGAGAATAGTC 8080 ||||||||||||| || |||||||| ||||| | | || || | || ||| |||||| Sbjct 457017 GCTTTGGCGGGAAGATTTATGACGAGCTATTCGAGTTAAATGGTACGTATGAGGATAGTC 456958 Query 8081 ATCATTTCTTTTACAAAGTGCCTGCAGCCTGCAACTCGAGATTCTCACCTCCAGATTATG 8140 || | |||||||| |||| | | |||||| || ||||| ||||||||||||| Sbjct 456957 ATAACTTCTTTTATCAAGTTTGAACTGTCTGCAATTCTAGATTTAGTCCTCCAGATTATG 456898 Query 8141 ATGAGAATGGTGAACCTATCCCTGGACCATTCTACATGGACAATTTTATTGGCGGTTGTG 8200 ||||||| || | ||| | || || | |||||| |||| || || || || || |||| Sbjct 456897 ATGAGAAGGGAAACCCTTTACCAGGGCTATTCTATATGGCAAACTTCATAGGAGGGTGTG 456838 Query 8201 AGGGAATGAAGCAGAAGGCTTGGACTCATATCACTTCTTCTGTACTCTTGCTGGCTCTGG 8260 | | |||||| || ||| ||||||| || || || ||| |||| || | | || ||| Sbjct 456837 AAGAAATGAAACAAAAGTCTTGGACACACATTACATCTGCTGTTCTTAAGTTATCTATGG 456778 Query 8261 AGGATCTTCATATGTCAGGGAATGTCATGGGTCAGGGTGACAATCAGATTGTCATACTGC 8320 |||||||| | || |||||||| ||| || || || |||||||||||||| || || | Sbjct 456777 AGGATCTTGAATTGAGAGGGAATGCCATAGGGCAAGGAGACAATCAGATTGTAATTCTAC 456718 Query 8321 ATGTAAAGAAATCGGACAACGCAG-----GTGAG-ATCACAAGAAAATTCATTCAGACTA 8374 || | | | ||| |||| || || || || || |||| ||||| | || Sbjct 456717 ATCT---GTCA-CGG--AACGAAGATATTGTCAGCATTACGAGAAGGTTCATCAACCATA 456664 Query 8375 TTA--TCGAGATGTTTGATAGCATCAACCATAAAGTAAAACCTAGAGAGACTTGGTTTTC 8432 ||| || || ||| | || || ||||| || ||||| ||||| |||||||| || Sbjct 456663 TTACGTCTCTAT-TTTCACAG-ATTAACCACCGTGTCAAACCAAGAGAAACTTGGTTCTC 456606 Query 8433 TCATCATCTCCACGAGTATGGAAAGACAAGAATATGGAAAGGCTGTGCCGTTCCGTCAGG 8492 | || |||||||| ||||| || || || |||||||| ||||| ||||| || Sbjct 456605 AAAAATACTTCACGAGTACGGAAAAACTAGGATCTGGAAAGGATGTGCTGTTCCTAGTGG 456546 Query 8493 GACAAAGAAAGCTGCTAGATTTATCCCTGATGTAAATGACGGTCTGTTCTCCATTCACTC 8552 || ||||| || | | | | || || ||| ||||||| || |||||||||| || Sbjct 456545 TACCAAGAATGCATCAAAAATGATTCCCGATATAAATGATGGATTGTTCTCCATAACATC 456486 Query 8553 TTGCATGTCTACAATAAATACTATCTCTGAATCAATAGCAAAGGCATCCTGGACTCCAGA 8612 | |||||||| || ||||| || |||| | | || ||||| || || Sbjct 456485 CAGTATGTCTACTATCAATACCATAACTGACGC---------TTCCTCTTGGACACCGGA 456435 Query 8613 CATCGCTTTCATAATGAATCAAATGGCGCAGGGTAACTTCATA 8655 | |||||||| | ||||||||||| || | ||| | |||| Sbjct 456434 TGTTGCTTTCATTTTAAATCAAATGGCACAAGCTAATTACATA 456392 >seq1238 Length=108287 Score = 370 bits (410), Expect = 9e-99 Identities = 445/605 (74%), Gaps = 0/605 (0%) Strand=Plus/Plus Query 7721 ACGGAATCTACAGACAAGAGGATCATATCATTATCCAATGCGGTAAAGAATTAGAACTAA 7780 |||| | |||| ||||| || || || | | | || ||||| || |||||||| || | Sbjct 94117 ACGGGGTATACAACCAAGAAGACCACATAAATGTGCAGTGCGGAAAGGAATTAGAGCTTA 94176 Query 7781 AGGAATCATCAGGGAGAGCATTCACAAAACAGACAAGCAATCAGAGATATATCCAAGTGT 7840 ||||| |||||||| ||||| |||||||| ||||| |||||| ||||| | || || Sbjct 94177 AGGAAGATTCAGGGAGGGCATTTACAAAACAAACAAGTAATCAGCGATATTTTCAGGTTG 94236 Query 7841 CGCTTGAGCAAGGAATAGCCACAACTATATTTCCCTTCGTGCCTGAACAATCTATGACTG 7900 | || || ||| || || | || || || || || ||||||||||| ||||| | Sbjct 94237 CCCTAGAACAACATATTGCTGAACACATCTTCCCTTTGGTTCCTGAACAATCGATGACCG 94296 Query 7901 ATTCTGAGATATCAATAATAAACAGACATATGGCTCATGTGTACTCTTTAGGAGGGACAT 7960 ||||||| ||| |||| || |||||||||||| ||||| | | || || || || ||| Sbjct 94297 ATTCTGAAATAGCAATCATCAACAGACATATGTCTCATATACATTCCTTGGGTGGATCAT 94356 Query 7961 CTGTGCTAATAAACATTGACCTCACAAAATGGTGTCTTCGACAAAGAGTTAATAATACAA 8020 | || | || ||||| ||| | ||||||||||||||||| |||||| | || || | Sbjct 94357 CAGTAGTCATCAACATAGACTTAACAAAATGGTGTCTTCGCTAAAGAGCAATAAAGACTA 94416 Query 8021 GCTTTGGCGGGAAAATATATGACGAACTATTTGGACTCAAAGGAATATACGAGAATAGTC 8080 ||||||||||||| || |||||||| ||||| | | || || | || ||| |||||| Sbjct 94417 GCTTTGGCGGGAAGATTTATGACGAGCTATTCGAGTTAAATGGTACGTATGAGGATAGTC 94476 Query 8081 ATCATTTCTTTTACAAAGTGCCTGCAGCCTGCAACTCGAGATTCTCACCTCCAGATTATG 8140 || | |||||||| |||| | | |||||| || ||||| ||||||||||||| Sbjct 94477 ATAACTTCTTTTATCAAGTTTGAACTGTCTGCAATTCTAGATTTAGTCCTCCAGATTATG 94536 Query 8141 ATGAGAATGGTGAACCTATCCCTGGACCATTCTACATGGACAATTTTATTGGCGGTTGTG 8200 ||||||| || | ||| | || || | |||||| |||| || || || || || |||| Sbjct 94537 ATGAGAAGGGAAACCCTTTACCAGGGCTATTCTATATGGCAAACTTCATAGGAGGGTGTG 94596 Query 8201 AGGGAATGAAGCAGAAGGCTTGGACTCATATCACTTCTTCTGTACTCTTGCTGGCTCTGG 8260 | |||||||| || ||||||||||| || || || ||| |||| || | | || ||| Sbjct 94597 AAGGAATGAAACAAAAGGCTTGGACACACATTACATCTACTGTTCTTAAGTTATCTATGG 94656 Query 8261 AGGATCTTCATATGTCAGGGAATGTCATGGGTCAGGGTGACAATCAGATTGTCATACTGC 8320 |||||||| | || || | ||||||||| || || | |||||||||||| || || | Sbjct 94657 AGGATCTTGAATTGAGGGGAACTGTCATGGGGCAAGGAGGCAATCAGATTGTAATTCTAC 94716 Query 8321 ATGTA 8325 || || Sbjct 94717 ATCTA 94721 Score = 311 bits (344), Expect = 7e-81 Identities = 500/714 (70%), Gaps = 21/714 (3%) Strand=Plus/Plus Query 7945 TCTTTAGGAGGGACATCTGTGCTAATAAACATTGACCTCACAAAATGGTGTCTTCGACAA 8004 || || || || |||| || | || || || || | ||||||||||||||||| ||| Sbjct 94844 TCCTTGGGTGGATCATCAGTAGTCATCAAAATAAACTTAACAAAATGGTGTCTTCGCCAA 94903 Query 8005 AGAGTTAATAATACAAGCTTTGGCGGGAAAATATATGACGAACTATTTGGACTCAAAGGA 8064 |||| | ||||| |||||||||||||| || |||||||| ||||| | | || || Sbjct 94904 AGAGCAATAAATACTAGCTTTGGCGGGAAGATTTATGACGAGCTATTCGAGTTAAATGGT 94963 Query 8065 ATATACGAGAATAGTCATCATTTCTTTTACAAAGTGCCTGCAGCCTGCAACTCGAGATTC 8124 | || ||| |||||||| | |||||||| |||| | | |||||| || ||||| Sbjct 94964 ACGTATGAGGATAGTCATAACTTCTTTTATCAAGTTTGAACTGTCTGCAATTCTAGATTT 95023 Query 8125 TCACCTCCAGATTATGATGAGAATGGTGAACCTATCCCTGGACCATTCTACATGGACAAT 8184 |||||||||||||||||||| || | ||| | || || |||||||| |||| || Sbjct 95024 AGTCCTCCAGATTATGATGAGAAGGGAAACCCTTTACCAGGGCCATTCTATATGGCAAAC 95083 Query 8185 TTTATTGGCGGTTGTGAGGGAATGAAGCAGAAGGCTTGGACTCATATCACTTCTTCTGTA 8244 || || || || ||||| |||||||| || ||||||||||| || || || ||| |||| Sbjct 95084 TTCATAGGAGGGTGTGAAGGAATGAAACAAAAGGCTTGGACACACATTACATCTACTGTT 95143 Query 8245 CTCTTGCTGGCTCTGGAGGATCTTCATATGTCAGGGAATGTCATGGGTCAGGGTGACAAT 8304 || | | || ||||||||||| | || || | ||||||||| || || | |||| Sbjct 95144 CTTAAGTTATCTATGGAGGATCTTGAATTGAGGGGAACTGTCATGGGGCAAGGAGGCAAT 95203 Query 8305 CAGATTGTCATACTGCATGTAAAGAAATCGGACAACG-CAGGTGAGATCACAAGAAAATT 8363 |||||||| || || ||| || | | || | | ||| || || |||| || Sbjct 95204 CAGATTGTAATTCTACATCTA---TCACCTGATATTGTCAG----CATTACGAGAAGGTT 95256 Query 8364 CATTCAGACTATTA--TCGAGATGTTTGATAGCATCAACCATAAAGTAAAACCTAGAGAG 8421 ||| | ||||| || || ||| | || || || ||| || ||||| ||||| Sbjct 95257 CATCAACCATATTACGTCTCTAT-TTTCACAG-ATTAATCATTGTGTCAAACCAAGAGAA 95314 Query 8422 ACTTGGTTTTCTCATCATCTCCACGAGTATGGAAAGACAAGAATATGGAAAGGCTGTGCC 8481 ||||| | || | || |||||||| ||||| || || || |||||||| ||||| Sbjct 95315 ACTTGATACTCAAAAATACTTCACGAGTACGGAAAAACTAGGATCTGGAAAGGATGTGCT 95374 Query 8482 GTTCCGTCAGGGACAAAGAAAGCTGCTAGATTTATCCCTGATGTAAATGACGGTCTGTTC 8541 ||||| || || ||||| || | | | | || || ||| ||||||| || ||||| Sbjct 95375 GTTCCTAGTGGTACCAAGAAGGCATCAAAAATGATTCCCGATATAAATGATGGATTGTTC 95434 Query 8542 TCCATTCACTCTTGCATGTCTACAATAAATACTATCTCTGAATCAATAGCAAAGGCATCC 8601 ||||| | |||||| || ||||| || |||| ||||||| | | | || Sbjct 95435 TCCAT---------AACGTCTACTATCAATACCATAACTGACGCAATAGCCAGGACCTCT 95485 Query 8602 TGGACTCCAGACATCGCTTTCATAATGAATCAAATGGCGCAGGGTAACTTCATA 8655 ||||| || || | |||||||| | ||||||||||| || | ||| | |||| Sbjct 95486 TGGACACCGGATGTTGCTTTCATTTTAAATCAAATGGCACAAGCTAATTACATA 95539 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40738401044880