Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_031278.1 Length=12247 Score E Sequences producing significant alignments: (Bits) Value seq1440 131 1e-26 seq8251 127 2e-25 seq1814 127 2e-25 seq9517 125 6e-25 seq2296 102 6e-18 >seq1440 Length=90230 Score = 131 bits (144), Expect = 1e-26 Identities = 215/310 (69%), Gaps = 0/310 (0%) Strand=Plus/Plus Query 7348 GATTCTTTTCTCTGATGTCCTGGGATTTACGAGATTATTTTGTTATAACGGAGTATCTGA 7407 |||| ||| |||| ||| ||| | | || ||||| ||||| |||||||||||| ||| Sbjct 52026 GATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGA 52085 Query 7408 TTAAAACCCATTTTGTTCCCCTCTTTTATGGACTGACAATGGCTGATGATATGACAACAG 7467 |||| | ||||||||||| |||| | ||| | ||||||||||| || || || | Sbjct 52086 TTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCG 52145 Query 7468 TAGTACGCAAGATGATGGAAAACACCAGTGGACAGGGTTCTGATGATTATGAGCACATAG 7527 |||| |||||||||| || | ||||||| || | |||||| | | Sbjct 52146 TAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCACAGTTATGATGAGGTGA 52205 Query 7528 GAATTGCCAATCACTTGGATTATGAAAAGTGGAATAATCACCAAAGATACCAATCTACAG 7587 || || ||||| | |||||||| |||||||| ||| | |||||| | | | Sbjct 52206 CCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATG 52265 Query 7588 AACCTGTATTCACAGTCATGGGCAAATTCCTCGGATATCCGAATTTAATTGCGAGAACTC 7647 | || || ||| |||||||||| ||| | |||| || ||||| || ||||||| | Sbjct 52266 ATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACAC 52325 Query 7648 ATGAGTTCTT 7657 |||| ||||| Sbjct 52326 ATGAATTCTT 52335 >seq8251 Length=2688 Score = 127 bits (140), Expect = 2e-25 Identities = 214/310 (69%), Gaps = 0/310 (0%) Strand=Plus/Plus Query 7348 GATTCTTTTCTCTGATGTCCTGGGATTTACGAGATTATTTTGTTATAACGGAGTATCTGA 7407 |||| ||| |||| ||| ||| | | || ||||| ||||| |||||||||||| ||| Sbjct 282 GATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGA 341 Query 7408 TTAAAACCCATTTTGTTCCCCTCTTTTATGGACTGACAATGGCTGATGATATGACAACAG 7467 |||| | ||||||||||| |||| | ||| | ||||||||||| || || || | Sbjct 342 TTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCG 401 Query 7468 TAGTACGCAAGATGATGGAAAACACCAGTGGACAGGGTTCTGATGATTATGAGCACATAG 7527 |||| |||||||||| || | ||||||| || | |||||| | Sbjct 402 TAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCGA 461 Query 7528 GAATTGCCAATCACTTGGATTATGAAAAGTGGAATAATCACCAAAGATACCAATCTACAG 7587 || || ||||| | |||||||| |||||||| ||| | |||||| | | | Sbjct 462 CCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATG 521 Query 7588 AACCTGTATTCACAGTCATGGGCAAATTCCTCGGATATCCGAATTTAATTGCGAGAACTC 7647 | || || ||| |||||||||| ||| | |||| || ||||| || ||||||| | Sbjct 522 ATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACAC 581 Query 7648 ATGAGTTCTT 7657 |||| ||||| Sbjct 582 ATGAATTCTT 591 >seq1814 Length=63972 Score = 127 bits (140), Expect = 2e-25 Identities = 214/310 (69%), Gaps = 0/310 (0%) Strand=Plus/Plus Query 7348 GATTCTTTTCTCTGATGTCCTGGGATTTACGAGATTATTTTGTTATAACGGAGTATCTGA 7407 |||| ||| |||| ||| ||| | | || ||||| ||||| |||||||||||| ||| Sbjct 1688 GATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGA 1747 Query 7408 TTAAAACCCATTTTGTTCCCCTCTTTTATGGACTGACAATGGCTGATGATATGACAACAG 7467 |||| | ||||||||||| |||| | ||| | ||||||||||| || || || | Sbjct 1748 TTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCG 1807 Query 7468 TAGTACGCAAGATGATGGAAAACACCAGTGGACAGGGTTCTGATGATTATGAGCACATAG 7527 |||| |||||||||| || | ||||||| || | |||||| | Sbjct 1808 TAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCGA 1867 Query 7528 GAATTGCCAATCACTTGGATTATGAAAAGTGGAATAATCACCAAAGATACCAATCTACAG 7587 || || ||||| | |||||||| |||||||| ||| | |||||| | | | Sbjct 1868 CCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATG 1927 Query 7588 AACCTGTATTCACAGTCATGGGCAAATTCCTCGGATATCCGAATTTAATTGCGAGAACTC 7647 | || || ||| |||||||||| ||| | |||| || ||||| || ||||||| | Sbjct 1928 ATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACAC 1987 Query 7648 ATGAGTTCTT 7657 |||| ||||| Sbjct 1988 ATGAATTCTT 1997 >seq9517 Length=2557 Score = 125 bits (138), Expect = 6e-25 Identities = 216/311 (69%), Gaps = 2/311 (1%) Strand=Plus/Plus Query 7348 GATTCTTTTCTCTGATGTCCTGGGATTTACGAGATTATTTTGTTATAACGGAGTATCTGA 7407 |||| ||| |||| ||| ||| | | || ||||| ||||| |||||||||||| ||| Sbjct 607 GATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGA 666 Query 7408 TTAAAACCCATTTTGTTCCCCTCTTTTATGGACTGACAATGGCTGATGA-TATGACAACA 7466 |||| | ||||||||||| |||| | ||| | ||||||||||| || || || || Sbjct 667 TTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAAC-ACC 725 Query 7467 GTAGTACGCAAGATGATGGAAAACACCAGTGGACAGGGTTCTGATGATTATGAGCACATA 7526 ||||| |||||||||| || | ||||||| || | |||||| | Sbjct 726 GTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCG 785 Query 7527 GGAATTGCCAATCACTTGGATTATGAAAAGTGGAATAATCACCAAAGATACCAATCTACA 7586 || || ||||| | |||||||| |||||||| ||| | |||||| | | Sbjct 786 ACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAAT 845 Query 7587 GAACCTGTATTCACAGTCATGGGCAAATTCCTCGGATATCCGAATTTAATTGCGAGAACT 7646 || || || ||| |||||||||| ||| | |||| || ||||| || ||||||| Sbjct 846 GATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACA 905 Query 7647 CATGAGTTCTT 7657 ||||| ||||| Sbjct 906 CATGAATTCTT 916 >seq2296 Length=40579 Score = 102 bits (112), Expect = 6e-18 Identities = 161/228 (71%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 7348 GATTCTTTTCTCTGATGTCCTGGGATTTACGAGATTATTTTGTTATAACGGAGTATCTGA 7407 |||| ||| |||| ||| ||| | | || ||||| ||||| |||||||||||| ||| Sbjct 1751 GATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGA 1810 Query 7408 TTAAAACCCATTTTGTTCCCCTCTTTTATGGACTGACAATGGCTGATGA-TATGACAACA 7466 |||| | ||||||||||| |||| | ||| | ||||||||||| || || || || Sbjct 1811 TTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAAC-ACC 1869 Query 7467 GTAGTACGCAAGATGATGGAAAACACCAGTGGACAGGGTTCTGATGATTATGAGCACATA 7526 ||||| |||||||||| || | ||||||| || | |||||| | Sbjct 1870 GTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCG 1929 Query 7527 GGAATTGCCAATCACTTGGATTATGAAAAGTGGAATAATCACCAAAGA 7574 || || ||||| | |||||||| |||||||| ||| | |||||| Sbjct 1930 ACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGA 1977 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39052960838360