Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_031278.1
Length=12247
Score E
Sequences producing significant alignments: (Bits) Value
seq1440 131 1e-26
seq8251 127 2e-25
seq1814 127 2e-25
seq9517 125 6e-25
seq2296 102 6e-18
>seq1440
Length=90230
Score = 131 bits (144), Expect = 1e-26
Identities = 215/310 (69%), Gaps = 0/310 (0%)
Strand=Plus/Plus
Query 7348 GATTCTTTTCTCTGATGTCCTGGGATTTACGAGATTATTTTGTTATAACGGAGTATCTGA 7407
|||| ||| |||| ||| ||| | | || ||||| ||||| |||||||||||| |||
Sbjct 52026 GATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGA 52085
Query 7408 TTAAAACCCATTTTGTTCCCCTCTTTTATGGACTGACAATGGCTGATGATATGACAACAG 7467
|||| | ||||||||||| |||| | ||| | ||||||||||| || || || |
Sbjct 52086 TTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCG 52145
Query 7468 TAGTACGCAAGATGATGGAAAACACCAGTGGACAGGGTTCTGATGATTATGAGCACATAG 7527
|||| |||||||||| || | ||||||| || | |||||| | |
Sbjct 52146 TAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCACAGTTATGATGAGGTGA 52205
Query 7528 GAATTGCCAATCACTTGGATTATGAAAAGTGGAATAATCACCAAAGATACCAATCTACAG 7587
|| || ||||| | |||||||| |||||||| ||| | |||||| | | |
Sbjct 52206 CCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATG 52265
Query 7588 AACCTGTATTCACAGTCATGGGCAAATTCCTCGGATATCCGAATTTAATTGCGAGAACTC 7647
| || || ||| |||||||||| ||| | |||| || ||||| || ||||||| |
Sbjct 52266 ATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACAC 52325
Query 7648 ATGAGTTCTT 7657
|||| |||||
Sbjct 52326 ATGAATTCTT 52335
>seq8251
Length=2688
Score = 127 bits (140), Expect = 2e-25
Identities = 214/310 (69%), Gaps = 0/310 (0%)
Strand=Plus/Plus
Query 7348 GATTCTTTTCTCTGATGTCCTGGGATTTACGAGATTATTTTGTTATAACGGAGTATCTGA 7407
|||| ||| |||| ||| ||| | | || ||||| ||||| |||||||||||| |||
Sbjct 282 GATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGA 341
Query 7408 TTAAAACCCATTTTGTTCCCCTCTTTTATGGACTGACAATGGCTGATGATATGACAACAG 7467
|||| | ||||||||||| |||| | ||| | ||||||||||| || || || |
Sbjct 342 TTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCG 401
Query 7468 TAGTACGCAAGATGATGGAAAACACCAGTGGACAGGGTTCTGATGATTATGAGCACATAG 7527
|||| |||||||||| || | ||||||| || | |||||| |
Sbjct 402 TAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCGA 461
Query 7528 GAATTGCCAATCACTTGGATTATGAAAAGTGGAATAATCACCAAAGATACCAATCTACAG 7587
|| || ||||| | |||||||| |||||||| ||| | |||||| | | |
Sbjct 462 CCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATG 521
Query 7588 AACCTGTATTCACAGTCATGGGCAAATTCCTCGGATATCCGAATTTAATTGCGAGAACTC 7647
| || || ||| |||||||||| ||| | |||| || ||||| || ||||||| |
Sbjct 522 ATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACAC 581
Query 7648 ATGAGTTCTT 7657
|||| |||||
Sbjct 582 ATGAATTCTT 591
>seq1814
Length=63972
Score = 127 bits (140), Expect = 2e-25
Identities = 214/310 (69%), Gaps = 0/310 (0%)
Strand=Plus/Plus
Query 7348 GATTCTTTTCTCTGATGTCCTGGGATTTACGAGATTATTTTGTTATAACGGAGTATCTGA 7407
|||| ||| |||| ||| ||| | | || ||||| ||||| |||||||||||| |||
Sbjct 1688 GATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGA 1747
Query 7408 TTAAAACCCATTTTGTTCCCCTCTTTTATGGACTGACAATGGCTGATGATATGACAACAG 7467
|||| | ||||||||||| |||| | ||| | ||||||||||| || || || |
Sbjct 1748 TTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTAGAACACCG 1807
Query 7468 TAGTACGCAAGATGATGGAAAACACCAGTGGACAGGGTTCTGATGATTATGAGCACATAG 7527
|||| |||||||||| || | ||||||| || | |||||| |
Sbjct 1808 TAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCGA 1867
Query 7528 GAATTGCCAATCACTTGGATTATGAAAAGTGGAATAATCACCAAAGATACCAATCTACAG 7587
|| || ||||| | |||||||| |||||||| ||| | |||||| | | |
Sbjct 1868 CCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAATG 1927
Query 7588 AACCTGTATTCACAGTCATGGGCAAATTCCTCGGATATCCGAATTTAATTGCGAGAACTC 7647
| || || ||| |||||||||| ||| | |||| || ||||| || ||||||| |
Sbjct 1928 ATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACAC 1987
Query 7648 ATGAGTTCTT 7657
|||| |||||
Sbjct 1988 ATGAATTCTT 1997
>seq9517
Length=2557
Score = 125 bits (138), Expect = 6e-25
Identities = 216/311 (69%), Gaps = 2/311 (1%)
Strand=Plus/Plus
Query 7348 GATTCTTTTCTCTGATGTCCTGGGATTTACGAGATTATTTTGTTATAACGGAGTATCTGA 7407
|||| ||| |||| ||| ||| | | || ||||| ||||| |||||||||||| |||
Sbjct 607 GATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGA 666
Query 7408 TTAAAACCCATTTTGTTCCCCTCTTTTATGGACTGACAATGGCTGATGA-TATGACAACA 7466
|||| | ||||||||||| |||| | ||| | ||||||||||| || || || ||
Sbjct 667 TTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAAC-ACC 725
Query 7467 GTAGTACGCAAGATGATGGAAAACACCAGTGGACAGGGTTCTGATGATTATGAGCACATA 7526
||||| |||||||||| || | ||||||| || | |||||| |
Sbjct 726 GTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCG 785
Query 7527 GGAATTGCCAATCACTTGGATTATGAAAAGTGGAATAATCACCAAAGATACCAATCTACA 7586
|| || ||||| | |||||||| |||||||| ||| | |||||| | |
Sbjct 786 ACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGAGGTGAGGGAAAT 845
Query 7587 GAACCTGTATTCACAGTCATGGGCAAATTCCTCGGATATCCGAATTTAATTGCGAGAACT 7646
|| || || ||| |||||||||| ||| | |||| || ||||| || |||||||
Sbjct 846 GATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTAATTTGTTTACGAGAACA 905
Query 7647 CATGAGTTCTT 7657
||||| |||||
Sbjct 906 CATGAATTCTT 916
>seq2296
Length=40579
Score = 102 bits (112), Expect = 6e-18
Identities = 161/228 (71%), Gaps = 2/228 (1%)
Strand=Plus/Plus
Query 7348 GATTCTTTTCTCTGATGTCCTGGGATTTACGAGATTATTTTGTTATAACGGAGTATCTGA 7407
|||| ||| |||| ||| ||| | | || ||||| ||||| |||||||||||| |||
Sbjct 1751 GATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGAGTATTTGA 1810
Query 7408 TTAAAACCCATTTTGTTCCCCTCTTTTATGGACTGACAATGGCTGATGA-TATGACAACA 7466
|||| | ||||||||||| |||| | ||| | ||||||||||| || || || ||
Sbjct 1811 TTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTACAAC-ACC 1869
Query 7467 GTAGTACGCAAGATGATGGAAAACACCAGTGGACAGGGTTCTGATGATTATGAGCACATA 7526
||||| |||||||||| || | ||||||| || | |||||| |
Sbjct 1870 GTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACTCAGAGTTATGATGAGGCG 1929
Query 7527 GGAATTGCCAATCACTTGGATTATGAAAAGTGGAATAATCACCAAAGA 7574
|| || ||||| | |||||||| |||||||| ||| | ||||||
Sbjct 1930 ACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATCAAAGA 1977
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 39052960838360
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |