Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14]
50,590 sequences; 462,688,933 total letters
Query= NC_031301.1
Length=11103
Score E
Sequences producing significant alignments: (Bits) Value
seq1440 100 2e-17
seq8251 96.9 2e-16
seq1814 96.9 2e-16
seq9517 95.1 9e-16
>seq1440
Length=90230
Score = 100 bits (110), Expect = 2e-17
Identities = 250/373 (67%), Gaps = 24/373 (6%)
Strand=Plus/Plus
Query 6313 AAAAGGTCGTTTCTTTTCTCTAATGTCATGGATGTTGCGAGAATATTTTGTGATAACAGA 6372
|||||| | || ||| |||| ||| ||| | || || || ||||| ||||| ||
Sbjct 52018 AAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGA 52077
Query 6373 ATATTTAATCAAGGAGAATTACGTTCCTCTGTTTAGTGGATTGACAATGGCTGATGATTT 6432
||||| || ||| || ||| |||||||| | || ||||| ||||||||||| || |
Sbjct 52078 GTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTA 52137
Query 6433 GACAACTGTCATATCAAAATTGTTAGATAGGAGTCAGGGACAAGGTGGTAAAGA----TT 6488
|| || || | ||| | |||| || || | | ||| | ||| |
Sbjct 52138 GAACACCGTAGT--CAACA-----AGAT--GATGCAAGCTTCATCTGG-ACAGACCACTC 52187
Query 6489 ACACTAATATTT--GT----ATCGCAAATCATATTGACTATGAGAAATGGAACAACCATC 6542
||| | || | || || ||||||||| |||| |||||||| |||||||| |||
Sbjct 52188 ACAGTTATGATGAGGTGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTATC 52247
Query 6543 AAAGAAAAGCTGCAACTGATCCAGTTTTCAAGGTCATGGGAGAGTTCTTAGGATATCCCA 6602
||||| | | || |||||| || ||| |||||||| || || |||| || |
Sbjct 52248 AAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACCTA 52307
Query 6603 ACTTATTCACAAGAACTCACGAATTCTTTCAAGAA--AGTCTAATTTACTACAATGGACG 6660
| || || || ||||| || |||||||||| || | ||| | || ||||| | ||
Sbjct 52308 ATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCT--TCTATTACAAAGATCG 52365
Query 6661 ACCAGATTTGATG 6673
||||||||| |||
Sbjct 52366 ACCAGATTTAATG 52378
>seq8251
Length=2688
Score = 96.9 bits (106), Expect = 2e-16
Identities = 248/374 (66%), Gaps = 28/374 (7%)
Strand=Plus/Plus
Query 6313 AAAAGGTCGTTTCTTTTCTCTAATGTCATGGATGTTGCGAGAATATTTTGTGATAACAGA 6372
|||||| | || ||| |||| ||| ||| | || || || ||||| ||||| ||
Sbjct 274 AAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGA 333
Query 6373 ATATTTAATCAAGGAGAATTACGTTCCTCTGTTTAGTGGATTGACAATGGCTGATGATTT 6432
||||| || ||| || ||| |||||||| | || ||||| ||||||||||| || |
Sbjct 334 GTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTA 393
Query 6433 GACAACTGTCATATCAAAATTGTTAGATAGGAGTCAGGGACAAGGTGGTAAAGATTACAC 6492
|| || || | ||| | |||| || || | | ||| | ||| |||
Sbjct 394 GAACACCGTAGT--CAACA-----AGAT--GATGCAAGCTTCATCTGG-ACAGAC--CAC 441
Query 6493 TAATATTTGT------------ATCGCAAATCATATTGACTATGAGAAATGGAACAACCA 6540
| | | || | || ||||||||| |||| |||||||| |||||||| |
Sbjct 442 TCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTA 501
Query 6541 TCAAAGAAAAGCTGCAACTGATCCAGTTTTCAAGGTCATGGGAGAGTTCTTAGGATATCC 6600
||||||| | | || |||||| || ||| |||||||| || || |||| ||
Sbjct 502 TCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACC 561
Query 6601 CAACTTATTCACAAGAACTCACGAATTCTTTCAAGAA--AGTCTAATTTACTACAATGGA 6658
|| || || || ||||| || |||||||||| || | ||| | || ||||| |
Sbjct 562 TAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCT--TCTATTACAAAGAT 619
Query 6659 CGACCAGATTTGAT 6672
||||||||||| ||
Sbjct 620 CGACCAGATTTAAT 633
>seq1814
Length=63972
Score = 96.9 bits (106), Expect = 2e-16
Identities = 248/374 (66%), Gaps = 28/374 (7%)
Strand=Plus/Plus
Query 6313 AAAAGGTCGTTTCTTTTCTCTAATGTCATGGATGTTGCGAGAATATTTTGTGATAACAGA 6372
|||||| | || ||| |||| ||| ||| | || || || ||||| ||||| ||
Sbjct 1680 AAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGA 1739
Query 6373 ATATTTAATCAAGGAGAATTACGTTCCTCTGTTTAGTGGATTGACAATGGCTGATGATTT 6432
||||| || ||| || ||| |||||||| | || ||||| ||||||||||| || |
Sbjct 1740 GTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACTA 1799
Query 6433 GACAACTGTCATATCAAAATTGTTAGATAGGAGTCAGGGACAAGGTGGTAAAGATTACAC 6492
|| || || | ||| | |||| || || | | ||| | ||| |||
Sbjct 1800 GAACACCGTAGT--CAACA-----AGAT--GATGCAAGCTTCATCTGG-ACAGAC--CAC 1847
Query 6493 TAATATTTGT------------ATCGCAAATCATATTGACTATGAGAAATGGAACAACCA 6540
| | | || | || ||||||||| |||| |||||||| |||||||| |
Sbjct 1848 TCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTA 1907
Query 6541 TCAAAGAAAAGCTGCAACTGATCCAGTTTTCAAGGTCATGGGAGAGTTCTTAGGATATCC 6600
||||||| | | || |||||| || ||| |||||||| || || |||| ||
Sbjct 1908 TCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACC 1967
Query 6601 CAACTTATTCACAAGAACTCACGAATTCTTTCAAGAA--AGTCTAATTTACTACAATGGA 6658
|| || || || ||||| || |||||||||| || | ||| | || ||||| |
Sbjct 1968 TAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCT--TCTATTACAAAGAT 2025
Query 6659 CGACCAGATTTGAT 6672
||||||||||| ||
Sbjct 2026 CGACCAGATTTAAT 2039
>seq9517
Length=2557
Score = 95.1 bits (104), Expect = 9e-16
Identities = 250/375 (67%), Gaps = 30/375 (8%)
Strand=Plus/Plus
Query 6313 AAAAGGTCGTTTCTTTTCTCTAATGTCATGGATGTTGCGAGAATATTTTGTGATAACAGA 6372
|||||| | || ||| |||| ||| ||| | || || || ||||| ||||| ||
Sbjct 599 AAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTTGTCATAACGGA 658
Query 6373 ATATTTAATCAAGGAGAATTACGTTCCTCTGTTTAGTGGATTGACAATGGCTGATGATTT 6432
||||| || ||| || ||| |||||||| | || ||||| ||||||||||| || |
Sbjct 659 GTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATGGCTGACGACT- 717
Query 6433 GACAACTGTCATA-TCAAAATTGTTAGATAGGAGTCAGGGACAAGGTGGTAAAGATTACA 6491
||||| | || |||| | |||| || || | | ||| | ||| ||
Sbjct 718 -ACAACAC-CGTAGTCAACA-----AGAT--GATGCAAGCTTCATCTGG-ACAGAC--CA 765
Query 6492 CTAATATTTGT------------ATCGCAAATCATATTGACTATGAGAAATGGAACAACC 6539
|| | | || | || ||||||||| |||| |||||||| ||||||||
Sbjct 766 CTCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATT 825
Query 6540 ATCAAAGAAAAGCTGCAACTGATCCAGTTTTCAAGGTCATGGGAGAGTTCTTAGGATATC 6599
|||||||| | | || |||||| || ||| |||||||| || || |||| |
Sbjct 826 ATCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTAC 885
Query 6600 CCAACTTATTCACAAGAACTCACGAATTCTTTCAAGAA--AGTCTAATTTACTACAATGG 6657
| || || || || ||||| || |||||||||| || | ||| | || ||||| |
Sbjct 886 CTAATTTGTTTACGAGAACACATGAATTCTTTCGGGATTCATTCT--TCTATTACAAAGA 943
Query 6658 ACGACCAGATTTGAT 6672
||||||||||| ||
Sbjct 944 TCGACCAGATTTAAT 958
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35394244336920
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |