Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20maculatus_20[genbank_20GCA_5F002091835.1_202017-04-14] 50,590 sequences; 462,688,933 total letters Query= NC_031302.1 Length=11370 Score E Sequences producing significant alignments: (Bits) Value seq1440 113 3e-21 seq9517 104 2e-18 seq8251 104 2e-18 seq1814 104 2e-18 >seq1440 Length=90230 Score = 113 bits (124), Expect = 3e-21 Identities = 225/331 (68%), Gaps = 2/331 (1%) Strand=Plus/Plus Query 6450 GAACTGAAAATTGGAGGCAGATTCTTTGCCTTGATGTCCTGGGAAATAAGGGATTATTTT 6509 || |||||| | ||| ||||| ||||| | ||| ||| | | ||||| ||| Sbjct 52007 GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTT 52066 Query 6510 GTAATGACTGAGTACTTGATTAAAACACACTTTGTTCCTCTATTTGATGGACTCACAATG 6569 || || || ||||| |||||||| | || ||||||||||| | | ||| | |||||| Sbjct 52067 GTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATG 52126 Query 6570 GCAGATGACTTAACAACGGTAATCGGGAAAATTCTTCGAAACACGGAAGGACA-AGGAGA 6628 || || |||| | || ||| || || || | | | | ||||| | | Sbjct 52127 GCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGACAGACCACT 52186 Query 6629 TACATCCTATGAAAATGTGACTTTTGCTGATCATATTGATTATGAAAAATGGAATAATCA 6688 ||| ||||| | ||||| | || ||||| |||||||||| || ||||| ||| | Sbjct 52187 CACAGT-TATGATGAGGTGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTA 52245 Query 6689 CCAAAGAGCAGAGGGAAACAACCCTACCTTCAGGGTTATGGGTCAATTTTTAGGGTACCC 6748 ||||||| |||||||| | || |||| || ||||||| |||||| || | || Sbjct 52246 TCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACC 52305 Query 6749 AAATTTGATTGAAAGAACACATGAAATCTTT 6779 |||||| || |||||||||||| ||||| Sbjct 52306 TAATTTGTTTACGAGAACACATGAATTCTTT 52336 >seq9517 Length=2557 Score = 104 bits (114), Expect = 2e-18 Identities = 223/331 (67%), Gaps = 2/331 (1%) Strand=Plus/Plus Query 6450 GAACTGAAAATTGGAGGCAGATTCTTTGCCTTGATGTCCTGGGAAATAAGGGATTATTTT 6509 || |||||| | ||| ||||| ||||| | ||| ||| | | ||||| ||| Sbjct 588 GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTT 647 Query 6510 GTAATGACTGAGTACTTGATTAAAACACACTTTGTTCCTCTATTTGATGGACTCACAATG 6569 || || || ||||| |||||||| | || ||||||||||| | | ||| | |||||| Sbjct 648 GTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATG 707 Query 6570 GCAGATGACTTAACAACGGTAATCGGGAAAATTCTTCGAAACACGGAAGGACAAGGAGAT 6629 || || |||| | || ||| || || || | | | | ||||| | | Sbjct 708 GCTGACGACTACAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGACA-GACCAC 766 Query 6630 ACATCCT-ATGAAAATGTGACTTTTGCTGATCATATTGATTATGAAAAATGGAATAATCA 6688 || | |||| | | ||| | || ||||| |||||||||| || ||||| ||| | Sbjct 767 TCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTA 826 Query 6689 CCAAAGAGCAGAGGGAAACAACCCTACCTTCAGGGTTATGGGTCAATTTTTAGGGTACCC 6748 ||||||| |||||||| | || |||| || ||||||| |||||| || | || Sbjct 827 TCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACC 886 Query 6749 AAATTTGATTGAAAGAACACATGAAATCTTT 6779 |||||| || |||||||||||| ||||| Sbjct 887 TAATTTGTTTACGAGAACACATGAATTCTTT 917 >seq8251 Length=2688 Score = 104 bits (114), Expect = 2e-18 Identities = 223/331 (67%), Gaps = 2/331 (1%) Strand=Plus/Plus Query 6450 GAACTGAAAATTGGAGGCAGATTCTTTGCCTTGATGTCCTGGGAAATAAGGGATTATTTT 6509 || |||||| | ||| ||||| ||||| | ||| ||| | | ||||| ||| Sbjct 263 GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTT 322 Query 6510 GTAATGACTGAGTACTTGATTAAAACACACTTTGTTCCTCTATTTGATGGACTCACAATG 6569 || || || ||||| |||||||| | || ||||||||||| | | ||| | |||||| Sbjct 323 GTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATG 382 Query 6570 GCAGATGACTTAACAACGGTAATCGGGAAAATTCTTCGAAACACGGAAGGACAAGGAGAT 6629 || || |||| | || ||| || || || | | | | ||||| | | Sbjct 383 GCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGACA-GACCAC 441 Query 6630 ACATCCT-ATGAAAATGTGACTTTTGCTGATCATATTGATTATGAAAAATGGAATAATCA 6688 || | |||| | | ||| | || ||||| |||||||||| || ||||| ||| | Sbjct 442 TCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTA 501 Query 6689 CCAAAGAGCAGAGGGAAACAACCCTACCTTCAGGGTTATGGGTCAATTTTTAGGGTACCC 6748 ||||||| |||||||| | || |||| || ||||||| |||||| || | || Sbjct 502 TCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACC 561 Query 6749 AAATTTGATTGAAAGAACACATGAAATCTTT 6779 |||||| || |||||||||||| ||||| Sbjct 562 TAATTTGTTTACGAGAACACATGAATTCTTT 592 >seq1814 Length=63972 Score = 104 bits (114), Expect = 2e-18 Identities = 223/331 (67%), Gaps = 2/331 (1%) Strand=Plus/Plus Query 6450 GAACTGAAAATTGGAGGCAGATTCTTTGCCTTGATGTCCTGGGAAATAAGGGATTATTTT 6509 || |||||| | ||| ||||| ||||| | ||| ||| | | ||||| ||| Sbjct 1669 GAGCTGAAACTAAAAGGAAGATTTTTTGCTCTCATGAGTTGGTCTCTTCGTGATTACTTT 1728 Query 6510 GTAATGACTGAGTACTTGATTAAAACACACTTTGTTCCTCTATTTGATGGACTCACAATG 6569 || || || ||||| |||||||| | || ||||||||||| | | ||| | |||||| Sbjct 1729 GTCATAACGGAGTATTTGATTAAGAAGCATTTTGTTCCTCTCTGTACAGGATTAACAATG 1788 Query 6570 GCAGATGACTTAACAACGGTAATCGGGAAAATTCTTCGAAACACGGAAGGACAAGGAGAT 6629 || || |||| | || ||| || || || | | | | ||||| | | Sbjct 1789 GCTGACGACTAGAACACCGTAGTCAACAAGATGATGCAAGCTTCATCTGGACA-GACCAC 1847 Query 6630 ACATCCT-ATGAAAATGTGACTTTTGCTGATCATATTGATTATGAAAAATGGAATAATCA 6688 || | |||| | | ||| | || ||||| |||||||||| || ||||| ||| | Sbjct 1848 TCAGAGTTATGATGAGGCGACCATAGCAAATCATGTTGATTATGAGAAGTGGAACAATTA 1907 Query 6689 CCAAAGAGCAGAGGGAAACAACCCTACCTTCAGGGTTATGGGTCAATTTTTAGGGTACCC 6748 ||||||| |||||||| | || |||| || ||||||| |||||| || | || Sbjct 1908 TCAAAGAGGTGAGGGAAATGATCCGGTCTTCTCAGTCATGGGTCGATTTTTTGGATTACC 1967 Query 6749 AAATTTGATTGAAAGAACACATGAAATCTTT 6779 |||||| || |||||||||||| ||||| Sbjct 1968 TAATTTGTTTACGAGAACACATGAATTCTTT 1998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 36248158065840