Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20melas_20[genbank_20GCA_5F000473525.2_202014-01-17] 20,229 sequences; 224,162,116 total letters Query= NC_031308.1 Length=2217 Score E Sequences producing significant alignments: (Bits) Value seq6601 98.7 1e-17 >seq6601 Length=16709 Score = 98.7 bits (108), Expect = 1e-17 Identities = 187/271 (69%), Gaps = 6/271 (2%) Strand=Plus/Plus Query 650 TTGGCTGCGACAATACTCTTTTTATTAGATCTGATGGCAAAGTGTGTGATGACAAACAAT 709 |||| || ||||| || |||| || |||||||||| ||||| |||||| ||| | | Sbjct 2337 TTGGATGTGACAACACACTTTACATACGATCTGATGGTAAAGTTTGTGATAGCAATAAGT 2396 Query 710 GCATAAGCACATCTATGTACCAGTTGCATCTACAATCTGGTTCTGTCGTATGCTTTAAAG 769 | | || || |||||| | | ||| || ||||| ||| |||| || | Sbjct 2397 GTTTGGAGACTTCAATGTACGAAAGACCATTACTCTCAAAATCTGTGGTAAGCTTCAAGG 2456 Query 770 ACTACAAAGGCGACATGATGAGATTTAAGATTGATGCTGCATACATAAGGACAAGGTATC 829 | || ||||| ||||| |||| || ||||| || ||||| ||||||| || | ||| Sbjct 2457 ATTATAAAGGTGACATAATGATGTTAAAGATCAATTCTGCAACCATAAGGTCATGTTATA 2516 Query 830 ATCTTGTGTATTACACAAGTGAGTATGAGATCAAAACTAGCTACACT--TCA-AACTGTA 886 | | |||||||||||||||| | ||| || ||| || ||| | ||| | |||| Sbjct 2517 GTTTGATGTATTACACAAGTGATTGTGACAT-AAAGGTA--CACAGTTATCATAGATGTA 2573 Query 887 AAGGGTCTGGCAGTTGCTGGTCAGGCGGTTG 917 |||| | || | ||||||| ||| ||||| Sbjct 2574 AAGGTGCAGGTACTTGCTGGCAAGGTGGTTG 2604 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6984098563162