Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20merus_20[genbank_20GCA_5F000473845.2_202014-01-17] 2,027 sequences; 288,048,996 total letters Query= NC_031318.1 Length=3864 Score E Sequences producing significant alignments: (Bits) Value seq1686 96.9 8e-17 >seq1686 Length=1852 Score = 96.9 bits (106), Expect = 8e-17 Identities = 214/315 (68%), Gaps = 6/315 (2%) Strand=Plus/Plus Query 2395 AGACAAAAGTGCTCAAAGAACATTTTATACTACACAACTGAGCCAGAATTTAGACTGCAC 2454 ||||||| || |||||||||| |||||||| ||| || ||||| || | | | Sbjct 213 AGACAAACATGTTCAAAGAACACTTTATACTTCACCCTCGACCCAGACTTCAATTTCTTC 272 Query 2455 AACACTTTTAGGTGCAGAAATGCAGGTAATTGTGTAAACGATGCCTGTGAAAAAGTCAAG 2514 || ||||| | ||| |||||| |||| | | |||| ||||| |||||| Sbjct 273 AATCTATTTAGATACAGGTCTGCAGGAGATTGCATCGATGATGTTTGTGAGGAAGTCACA 332 Query 2515 ACCACTGATTCGTTACCTGTTG-ATTCAGCAGATGAAAAGAAAGCAGGAGTCAGTGGTTG 2573 |||| || | | | || ||| || || |||||| || || || |||||||||| Sbjct 333 ACCAATGGTAAGGTTCCAATTGCATACAT-AGATGATTCTAAGGCTGGCATCAGTGGTTG 391 Query 2574 CTTGAGGGTAACAGGTTTCTGGGGCAAAGGCTGCTTCTACATGGATCAGGCTTGCCAGTT 2633 | ||||| ||||| || |||||||||||||| ||||| | ||| ||||| | || Sbjct 392 TTCTAGGGTGACAGGATTTTGGGGCAAAGGCTGTTTCTATGCAGGTCAAGCTTGTAATTT 451 Query 2634 TTATAAGGTTGAACTAGACAATTCA--AAAAGAATCTCCTATGAGATTTTTGATTGCAAG 2691 ||| || | ||| || | || ||| ||||| | |||||| ||| | | |||| Sbjct 452 TTACAAAGCAGAATTA-AGAAATCATGAAAAG-GTGAGCTATGAAGTTTCTAAGTGCAGT 509 Query 2692 GAGTGGTTCTGGGAA 2706 || ||| | |||||| Sbjct 510 GAATGGGTATGGGAA 524 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 12252528351595