Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_008604.2 Length=10837 Score E Sequences producing significant alignments: (Bits) Value seq396 107 1e-19 >seq396 Length=2043 Score = 107 bits (118), Expect = 1e-19 Identities = 366/565 (65%), Gaps = 14/565 (2%) Strand=Plus/Plus Query 7613 GTGAACGAGACAGACAAG-GGTGATTTCGTCTCGCGGGGCGGTTTGAAGATGGATGAGCT 7671 ||| |||||||| |||| || |||| ||| || |||| || |||||||| |||| | Sbjct 1145 GTGGACGAGACAC-CAAGAGGAGATTACGTGTCTAGGGGTGGGCTGAAGATGCGTGAGAT 1203 Query 7672 CATCAGGAAGTTCCAA--TGGGAACCGAAGGGGGCTGCACTTGACTTAGGATGTGGCCGC 7729 ||| ||| || | |||||||| || || | | || || || || || || Sbjct 1204 CAT--GGAGGTGCATGGCTGGGAACCAAATGGAAAAGTCATCGATTTGGGCTGCGGACGT 1261 Query 7730 GGAGGATGGACTCAACGTCTGGTGATGGACACTAGGGTCAAC----TCCGTGACGGGGTT 7785 || || |||| ||| | ||| |||||| || |||| | |||||| ||| Sbjct 1262 GGTGGCTGGAGTCAGCACTTGGCAATGGACCGGAGAGTCACCGAGGTCCGTG----GGTA 1317 Query 7786 GACGCTGGGTGGAGCAAACCGGGAAAATCCCCTACCGTTTAAGACGAAAGGACACAACCT 7845 ||||| || ||| | | |||||||||||| || | ||| | || |||||||| Sbjct 1318 CACGCTTGGCGGATCGAGCCGGGAAAATCCGGAGATCTTCATGACTTATGGCCACAACCT 1377 Query 7846 AGCCGTGCTAAAAGCCGGTGTTGACGTGTACGCGACTGAGCCGCGAGACTGCAACACGAT 7905 |||| | ||| || || || |||||| |||||||| | | |||||| | Sbjct 1378 CTGCGTGTTGAAACCCCTAGTGGATGTGTACAAACTTGAGCCGCATGTCACCAACACTGT 1437 Query 7906 TGTGTGTGACATAGGCGAGAGTGACCCCCGGCCTGAGGTGGAGAAGACAAGAACGCTGAA 7965 | | |||||||| || |||||||| ||| | | || |||| || | |||||||| Sbjct 1438 TATTTGTGACATTGGAGAGAGTGATCCCTCAGCAGCAGTTGAGAGAACTCGCACGCTGAA 1497 Query 7966 AGTGCTGACGATGCTCGAGAAATGGTTAGTCCACAATCCAGGTGCTGCGTTCTGTTGTAA 8025 ||| || | | | ||| | ||| | | | ||| || ||| || || Sbjct 1498 GGTGTTGGCACTCTTAGAGGACTGGCTCGCCGTGTCGAAAGGAGCCAATTTCGTCTGCAA 1557 Query 8026 GGTGCTGTCTCCGTACCACCTCGAAGTGTTGCGCAAGCTAGAGATGCTTCAGCACAAGCA 8085 ||| |||||||| ||||| || |||||| || || || | | || ||| | | Sbjct 1558 GGTCCTGTCTCCATACCATTCAGACGTGTTGAAAAAACTCGAAACCTTGCAACACGCGTA 1617 Query 8086 CAATGGAAAATTGGTCAGGTTGTCCTTGAGCCGGAACTCCACTGCAGAAATGTACTACGT 8145 ||| |||| |||||| || ||||| ||||| || ||||||||||| ||| | Sbjct 1618 TGGTGGCCGGCTGGTTAGGTTGAGATTAAGCCGAAACTCAACAGCAGAAATGTATTACAT 1677 Query 8146 CTCAGGTCCGCGAGCGAACATCGTC 8170 || || || || || ||||| ||| Sbjct 1678 ATCTGGACCACGTGCCAACATGGTC 1702 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34562936369192