Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_012671.1 Length=10865 Score E Sequences producing significant alignments: (Bits) Value seq396 86.0 4e-13 >seq396 Length=2043 Score = 86.0 bits (94), Expect = 4e-13 Identities = 370/581 (64%), Gaps = 18/581 (3%) Strand=Plus/Plus Query 7607 TACAGGTCCCGAGGTGTCAATGAAACGGATAAGGGAGACTATGTTTCTCGAGGTGGCCTG 7666 |||||||| ||| ||| | || || | ||||| || || ||| | ||||| ||| Sbjct 1130 TACAGGTCACGATCTGTGGACGAGACACCAAGAGGAGATTACGTGTCTAGGGGTGGGCTG 1189 Query 7667 AAGATGGACGAGTTGCTGAGGAAATATCAGTGGGAACCGAAAGGTGTTGCTGTTGATCTC 7726 |||||| ||| | || | || |||||||| || || | | ||| | Sbjct 1190 AAGATGCGTGAGATCATGGAGGTGCATGGCTGGGAACCAAATGGAAAAGTCATCGATTTG 1249 Query 7727 GGATGCGGAAGGGGAGGTTGGAGTCAGCGTCTGGTGATGGACTCACGGA---TTAGCGCT 7783 || |||||| | || || |||||||||| ||| |||||| |||| | | || Sbjct 1250 GGCTGCGGACGTGGTGGCTGGAGTCAGCACTTGGCAATGGAC---CGGAGAGTCACCGAG 1306 Query 7784 GTCCACGGATTCACCCTTGGAGGTAACAACCGAGAGAACCCCCAGCCGTTCCGGACAAAA 7843 |||| || | ||| ||||| || | ||| || || || || ||| ||| | Sbjct 1307 GTCCGTGGGTACACGCTTGGCGGATCGAGCCGGGAAAATCCGGAGATCTTCATGACTTAT 1366 Query 7844 GGGCATAACCTAGCCACATTGAAAGCTGGCGTCGACGTGTATGCC---GAGCCGCCAAAA 7900 || || ||||| | |||||| | || || ||||| ||||||| | Sbjct 1367 GGCCACAACCTCTGCGTGTTGAAACCCCTAGTGGATGTGTACAAACTTGAGCCGC---AT 1423 Query 7901 GATTGCAACACGATCGTCTGCGACATTGGAGAAAGCGATTCTCGTGGTGATGTGGAGCGA 7960 | |||||| | | || ||||||||||| || ||| | | | || ||| || Sbjct 1424 GTCACCAACACTGTTATTTGTGACATTGGAGAGAGTGATCCCTCAGCAGCAGTTGAGAGA 1483 Query 7961 ACCCGCACGTTGAAGGTACTGGGCTTGCTTGAGAAGTGGTTGGAGCACAACCCAAATGCA 8020 || |||||| ||||||| ||| | | ||| | ||| | | | | || | | Sbjct 1484 ACTCGCACGCTGAAGGTGTTGGCACTCTTAGAGGACTGGCTCGC---CGTGTCGAAAGGA 1540 Query 8021 GC---TTTTGCCTGCAAGGTCTTGTCTCCCTATCACATCGAAGTGCTTCGAAAACTGGAG 8077 || ||| | |||||||||| ||||||| || || || ||| | |||||| || Sbjct 1541 GCCAATTTCGTCTGCAAGGTCCTGTCTCCATACCATTCAGACGTGTTGAAAAAACTCGAA 1600 Query 8078 ACGTTACAACACAAGTACGGAGGCCGGGTCGTTCGGCTGTCGTATAGCCGGAACTCCACC 8137 || || |||||| ||| || |||||| | ||| || || | ||||| ||||| || Sbjct 1601 ACCTTGCAACACGCGTATGGTGGCCGGCTGGTTAGGTTGAGATTAAGCCGAAACTCAACA 1660 Query 8138 GCTGAAATGTATTACATCTCGGGCGTTCGGGCAAACATTGT 8178 || |||||||||||||| || || || || ||||| || Sbjct 1661 GCAGAAATGTATTACATATCTGGACCACGTGCCAACATGGT 1701 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34652535685768