Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_031310.1 Length=2111 Score E Sequences producing significant alignments: (Bits) Value seq202 190 3e-45 >seq202 Length=4132 Score = 190 bits (210), Expect = 3e-45 Identities = 530/795 (67%), Gaps = 40/795 (5%) Strand=Plus/Plus Query 467 GCCAAGGTGTATAATATACTTGGCATGACTCCTGCTGATGTAGGTGCAACTCATGCTGGA 526 |||||| | ||| ||| | || || ||| ||| || || ||| | | ||||| || Sbjct 1775 GCCAAGAT-TATTTTATCTTGGGGATAACTGCTGAAGAGGTTGGTACTAGGCATGCAGGT 1833 Query 527 ATGCAGTTTGACTTTGGAGAACTAGAAGCAGAGTTTGCCAGAGTCTGTGTG---GATTAC 583 | ||||||||||| | || || ||||| ||||| | ||| || || ||||| Sbjct 1834 GTCCAGTTTGACTTCAGTGATCTTGAAGCTGAGTT--CAAGAAAGTG-GTCACTGATTAT 1890 Query 584 CGAAGTGGCCTTAACAAGACTACTAGAAGCTATGCTCTTGAATTTGCTGTCAAAATAATA 643 || || | ||||| || |||| |||||||| || ||||||||||| || | || Sbjct 1891 GGAGATGCTGTCAACAAAACCACTAAGAGCTATGCCCTGGAATTTGCTGTAAAGGTGATC 1950 Query 644 TATGAGGTTGGGCCAGAGTCGCGTCAAGTCAAGAAGGGACAGATGGACAAGAGATGGAAA 703 || ||||| || || | || || ||||| ||||||||| | || |||| ||||| Sbjct 1951 TACGAGGTAGGCCCTGCCTCACGCCAAGTAAAGAAGGGAACAACTGATAAGAAGTGGAAG 2010 Query 704 TTCCGATTTGCCATGCCTG-----GTAAGA----AGTTCTCATGTGTGTATGTGGCTTCT 754 ||||| || | || || ||| | |||| | || ||| | || || Sbjct 2011 TTCCGGTTCCTGAAGCGTGAAGGACTAAAAGCTGTGTTCACCACAGTTTATATTGCCTCA 2070 Query 755 TATAAGAATAATGAACCACCGATAGCTCAACCGCGTG-TAGACAAGAACATGCTAATCTT 813 | ||||||| | ||||| | ||| |||| || ||| ||| || | || | | Sbjct 2071 TTTAAGAATGCAGCGCCACCATTGGCTAAACCAGTTGTTAGCCAA-AATACTTTACTTCT 2129 Query 814 AACGATGAAACAAGCTAGCTTGTTGGCACAAGTGACATTCGGTGAAGCTATTAAGATATG 873 ||| ||||| ||||| || ||| |||| ||| || |||| ||| || || || | || Sbjct 2130 AACAATGAAGCAAGCCAGTTTGCTGGCTCAATCAACCTTCGCTGATGCAATAAAATTGTG 2189 Query 874 CTACACTGATGAGCAAGTCCTGATGTCACCACTGTGTGGTGCCATCTTCTCGAAGCGTGA 933 | || || || | || |||||| | ||||| |||||||| || ||||| ||| | Sbjct 2190 CATTACAGACGACCTTGTGCTGATGACTCCACTATGTGGTGCAATATTCTCTAAGAACAA 2249 Query 934 CATAGAGGAAATAAAC-CGCGTATGTGGGCGTGCTGACAACCCTGATAGTGTC--TCGTC 990 | |||||||| ||| | || ||| | |||| ||||| ||| | ||| Sbjct 2250 CTTAGAGGAACTAAGCGAGCTTAT-CCATCCAGCTG------CTGATGGTGACAAGCGTG 2302 Query 991 GACT---CTGAG-GACACTTTCTCAAAGCTGCCAAAGCGGTGGGCATTATCTTGAGCATT 1046 | || || || ||| ||||| || || || |||||||| |||||||| ||| | | Sbjct 2303 GGCTGACCTTAGTGACTCTTTCACAGAGTTGTCAAAGCGGAGGGCATTACCTTCGTGAAT 2362 Query 1047 CTGATTGCACGGTTGCTGTAGTTGCTGCAGTGTGTGCAACCCGGAACATGACAGA--CCA 1104 ||| || | || || || ||||| || |||||||| || ||||||||||||| ||| Sbjct 2363 CTGTCTGTGCAGTGGCAGTTGTTGCAGCTGTGTGTGCCACTAGGAACATGACAGATTCCA 2422 Query 1105 GAAGACAAGGAACCAGATCATAACAAAGACATATAAGCAGTACATAGGGGCTAACAAGCA 1164 ||| | |||||||||| || |||||||| || ||||| | | || |||| Sbjct 2423 -AAG-TTCGTGACCAGATCATCACGAAGACATACAAACAGTATGTTGCCTCTGGTAAGCC 2480 Query 1165 GTTCTCTATGGAG--ATGTATGAGGCCCTATGTCAGTTTGCAACTGGTGGTGTTCCTGCT 1222 | | ||| || | ||||| |||||| ||||||| || ||||| || || ||| Sbjct 2481 AT--TTGATGCAGGCCTTTATGAAAGCCTATGCAAGTTTGCCACAGGTGGGGTACCAGCT 2538 Query 1223 GATCACTCAGCAAAG 1237 || ||||| |||||| Sbjct 2539 GAGCACTCTGCAAAG 2553 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 6646352120996