Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20minimus_20[genbank_20GCA_5F000349025.1_202013-03-28] 678 sequences; 201,793,324 total letters Query= NC_033694.1 Length=10095 Score E Sequences producing significant alignments: (Bits) Value seq396 98.7 6e-17 >seq396 Length=2043 Score = 98.7 bits (108), Expect = 6e-17 Identities = 171/247 (69%), Gaps = 4/247 (2%) Strand=Plus/Plus Query 7810 AACACCATAATTTGCGACATAGGTGAGAGTGACCCGCGTCCTGAAGTTGAAAAAACTCGA 7869 ||||| | ||||| ||||| || |||||||| || | | |||||| | |||||| Sbjct 1430 AACACTGTTATTTGTGACATTGGAGAGAGTGATCCCTCAGCAGCAGTTGAGAGAACTCGC 1489 Query 7870 ACGCTGAAGGTTTTGGGAATGCTGGAGAAATGGCTGGAAGTCAATCCAAACG--CCTCTT 7927 ||||||||||| |||| | | | ||| | ||||| | || || ||| | || || Sbjct 1490 ACGCTGAAGGTGTTGGCACTCTTAGAGGACTGGCTCGCCGTG--TCGAAAGGAGCCAATT 1547 Query 7928 TTTGCTGCAAAGTGCTATCACCTTATCACTTGGACGTGCTTCGAAAGTTAGAGTCGCTGC 7987 | |||||| || || || || || || | |||||| | ||| | || | ||| Sbjct 1548 TCGTCTGCAAGGTCCTGTCTCCATACCATTCAGACGTGTTGAAAAAACTCGAAACCTTGC 1607 Query 7988 AACACAAGTATAACGGGCGGCTGGTTCGACTGTCTTACAGTCGGAACTCAACAGCAGAAA 8047 ||||| |||| || ||||||||| | || | || || |||||||||||||||| Sbjct 1608 AACACGCGTATGGTGGCCGGCTGGTTAGGTTGAGATTAAGCCGAAACTCAACAGCAGAAA 1667 Query 8048 TGTATTA 8054 ||||||| Sbjct 1668 TGTATTA 1674 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 32188554479928