Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_028230.1 Length=12020 Score E Sequences producing significant alignments: (Bits) Value seq109 87.8 1e-13 >seq109 Length=4790 Score = 87.8 bits (96), Expect = 1e-13 Identities = 204/303 (67%), Gaps = 10/303 (3%) Strand=Plus/Minus Query 7251 ATGTCTTGGGAATTAAGAGAATATTTTGTTTCTACTGAATATCTGATaaaaaaaTATTAT 7310 ||||| ||| || |||||||||| ||||| ||||||| || || |||| ||||| Sbjct 4036 ATGTCATGGAAACTAAGAGAATACTTTGTCATAGCTGAATACCTTATCAAAACCCATTAT 3977 Query 7311 GTTCCATTATTCAAGGGATTGACAATGGCAGATGGATTAATGACAGTGGTGAAGAAAATG 7370 ||| ||| | | | |||||| ||||| || | || | ||||| | |||||||| Sbjct 3976 GTTAAATTGTGCCCCGAATTGACCATGGCTGACAGCTTGAACACAGTAATTGAGAAAATG 3917 Query 7371 ATTGATTCATCATGCGGGC--AAG---GAAATCTAGATTACAACACTGTATCAATTGCCA 7425 | | || || |||| ||| ||| || | || |||||| | |||| || | Sbjct 3916 TATTTGGCGTC-TGAGGGCCAAAGTACGAACTC-ATATGACAACA---TCACAATAGCAA 3862 Query 7426 ATCATATAGATTATACAAAGTGGAACAATCACCAGAGAAGGAAGTCCAATCACCCTGTTT 7485 | || | |||||||| ||||||||||| ||||||| | | | || ||||| | | Sbjct 3861 ACCACGTCGATTATACGAAGTGGAACAACTTCCAGAGAGGTGATGCTAAAAACCCTATCT 3802 Query 7486 TTACTGTGATGGGACAGTTTTTGGGGTACCCGAACCTGATCACTAGAACTCATGAGTTCT 7545 | | | ||||| || ||||| || | || || || | |||||| ||||| ||| Sbjct 3801 TCAAAGCAATGGGTCAATTTTTAGGTTTACCCAATCTCTTTGTTAGAACCCATGAAATCT 3742 Query 7546 TCG 7548 ||| Sbjct 3741 TCG 3739 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 38347582090048