Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Anopheles_20quadriannulatus_20[genbank_20GCA_5F000349065.1_202013- 03-28] 2,823 sequences; 283,828,998 total letters Query= NC_028239.1 Length=16133 Score E Sequences producing significant alignments: (Bits) Value seq109 100 3e-17 >seq109 Length=4790 Score = 100 bits (110), Expect = 3e-17 Identities = 225/333 (68%), Gaps = 4/333 (1%) Strand=Plus/Minus Query 11351 TGGGAGCTGAGGGAGTACTTCGTATTTACTGAATACCTAATTAAAGAGCATTTTGTACCA 11410 ||| | || || || ||||| || | |||||||||| || ||| |||| ||| | Sbjct 4030 TGGAAACTAAGAGAATACTTTGTCATAGCTGAATACCTTATCAAAACCCATTATGTTAAA 3971 Query 11411 TTATTTAAGGGTCTGACTATGGCTGATGACTTACAAACAGTTATTAAGAAGATGATAGAT 11470 || | | |||| |||||||| ||| | ||||| ||| |||| ||| || | Sbjct 3970 TTGTGCCCCGAATTGACCATGGCTGACAGCTTGAACACAGTAATTGAGAAAATG-TATTT 3912 Query 11471 GT-GTCTTCTGGTCAAGGCACTGAGACATATGAGAATATCACCATTGCAAATAACATAGA 11529 | |||| || ||| | || | ||||||| || ||||| || ||||| || | || Sbjct 3911 GGCGTCTGAGGGCCAAAGTACGAACTCATATGACAACATCACAATAGCAAACCACGTCGA 3852 Query 11530 TTATGAGAAATGGAATAATTATCAAAGGTATGAATCTAATCATGCAATATTCACAGTGAT 11589 |||| ||| ||||| || | || || ||| |||| | | || |||| || || Sbjct 3851 TTATACGAAGTGGAACAACTTCCAGAGAGGTGATGCTAAAAACCCTATCTTCAAAGCAAT 3792 Query 11590 GGGGCAATTTTTAGGGTATCCAAAGTTAATTGCAAGAACTCATGAGTTTTTTGAGAAAAG 11649 ||| ||||||||||| | || || | ||| ||||| ||||| | || | |||| | Sbjct 3791 GGGTCAATTTTTAGGTTTACCCAATCTCTTTGTTAGAACCCATGAAATCTTCGGGAAA-G 3733 Query 11650 CCTAGTT-TATTATAACCAAAGACCTGACTTAA 11681 | | ||| ||||| || | ||||||||||||| Sbjct 3732 CGTTGTTCTATTACAAAGATAGACCTGACTTAA 3700 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 51505518756704