Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_002526.1 Length=14900 Score E Sequences producing significant alignments: (Bits) Value seq2708 96.9 3e-16 >seq2708 Length=213413 Score = 96.9 bits (106), Expect = 3e-16 Identities = 243/367 (66%), Gaps = 2/367 (1%) Strand=Plus/Minus Query 10043 GCTAAGGAAAGAGAGCTTAAAGAAGA-AGGGAGGtttttttCATTAATGTCTTATGAATT 10101 || ||||| | ||| || |||| | ||| || |||||| |||| ||||| | | | Sbjct 50362 GCGAAGGAGCGGGAG-TTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGAT 50304 Query 10102 AAGGGATTATTTTGTCTCAACGGAGTACTTAATaaaaaaaTACTTTGTGCCATTATTTGA 10161 | || || ||||| || || ||| | || || | ||||| ||||| || | Sbjct 50303 TCGAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAA 50244 Query 10162 AGGATTGACAATGGCTGATGACCTAAATACTGTTATCaaaaaaaTGTTAGATGTCTCTAG 10221 || |||| |||||||||| |||| || || || ||||||| | || ||| Sbjct 50243 GGGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGC 50184 Query 10222 TGGTCAGGGAACAAGGGAATATGAATACATCACAATTGCCAATAATATTGATTATGAAAA 10281 ||| || ||| | || |||||| |||| ||||| ||| || | || || || || Sbjct 50183 TGGACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAA 50124 Query 10282 ATGGAATAACTATCAAAGAATTGAATCCAATGGGCCGGTGTTCACTGTGATGGGACGATT 10341 ||||||||| |||| || | || || | | || || |||| || ||||| | ||| Sbjct 50123 ATGGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATT 50064 Query 10342 TTTAGGCTTGCCTAATTTGTTTACTAGAACTCATGAGTTTTTCCAAAAGAGTTTGATCTA 10401 | |||| ||| | || | ||| | || |||||| | || ||||| | |||||| Sbjct 50063 CCTTGGCTATCCTCACTTAATCACTCGGACACATGAGATATTTGAAAAGTCATGGATCTA 50004 Query 10402 TTACAAC 10408 ||||||| Sbjct 50003 TTACAAC 49997 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 47559781928114