Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_011639.1 Length=13196 Score E Sequences producing significant alignments: (Bits) Value seq2708 120 3e-23 >seq2708 Length=213413 Score = 120 bits (132), Expect = 3e-23 Identities = 247/363 (68%), Gaps = 6/363 (2%) Strand=Plus/Minus Query 8437 ATTGGAAGATTCTTCTCTTTAATGTCATGGGAACTCAGAGAGTATTTTGTTTTTACTGAG 8496 || |||||||| || | || ||||| ||| | | ||||||| ||||| | ||||| Sbjct 50338 ATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAA 50279 Query 8497 TACCTTATTAAGGAATATTTTGTTCCTCTATTCCATGGATTAACTATGGCTGATGATCTA 8556 ||||| || ||| |||||||||| | ||| | || | ||| |||||||||||||| Sbjct 50278 TACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTA 50219 Query 8557 CAATCTGTTATAAAGAAGATGTTAGAAAATTCTCAAGGCCAAGGATCTAATGATTATGAG 8616 | || || || ||| | || | || || |||||| ||||||||| Sbjct 50218 ACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATCTGATTATGAA 50159 Query 8617 TATGTTTCAATAGCAAATCATATTGATTATGAAAAATGGAATAATCACCAAAGGAAAGAA 8676 ||| | || || |||||| | || || || |||||||||||||| || |||||||| Sbjct 50158 ACTGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAG 50099 Query 8677 TCAAATTATTATGTTTTCAAAGTAATGGGCCAGTGTTTCGGTCTTCCAAACTTATTTACA 8736 |||| | || |||| || ||||| || | | || ||| ||||| | || Sbjct 50098 TCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCCTCACTTAATCACT 50039 Query 8737 CGAACACATGAATTCTTTGAACAAAGT--TTGATTTATTATCCTCAA-AGAGCTGATTTG 8793 || |||||||| | ||||| ||||| | ||| ||||| | ||| || | |||||| Sbjct 50038 CGGACACATGAGATATTTGA--AAAGTCATGGATCTATTA-CAACAATAGGGGTGATTTA 49982 Query 8794 ATG 8796 ||| Sbjct 49981 ATG 49979 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 42107190364802