Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_011639.1
Length=13196
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 120 3e-23
>seq2708
Length=213413
Score = 120 bits (132), Expect = 3e-23
Identities = 247/363 (68%), Gaps = 6/363 (2%)
Strand=Plus/Minus
Query 8437 ATTGGAAGATTCTTCTCTTTAATGTCATGGGAACTCAGAGAGTATTTTGTTTTTACTGAG 8496
|| |||||||| || | || ||||| ||| | | ||||||| ||||| | |||||
Sbjct 50338 ATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAA 50279
Query 8497 TACCTTATTAAGGAATATTTTGTTCCTCTATTCCATGGATTAACTATGGCTGATGATCTA 8556
||||| || ||| |||||||||| | ||| | || | ||| ||||||||||||||
Sbjct 50278 TACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTA 50219
Query 8557 CAATCTGTTATAAAGAAGATGTTAGAAAATTCTCAAGGCCAAGGATCTAATGATTATGAG 8616
| || || || ||| | || | || || |||||| |||||||||
Sbjct 50218 ACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATCTGATTATGAA 50159
Query 8617 TATGTTTCAATAGCAAATCATATTGATTATGAAAAATGGAATAATCACCAAAGGAAAGAA 8676
||| | || || |||||| | || || || |||||||||||||| || ||||||||
Sbjct 50158 ACTGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAG 50099
Query 8677 TCAAATTATTATGTTTTCAAAGTAATGGGCCAGTGTTTCGGTCTTCCAAACTTATTTACA 8736
|||| | || |||| || ||||| || | | || ||| ||||| | ||
Sbjct 50098 TCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCCTCACTTAATCACT 50039
Query 8737 CGAACACATGAATTCTTTGAACAAAGT--TTGATTTATTATCCTCAA-AGAGCTGATTTG 8793
|| |||||||| | ||||| ||||| | ||| ||||| | ||| || | ||||||
Sbjct 50038 CGGACACATGAGATATTTGA--AAAGTCATGGATCTATTA-CAACAATAGGGGTGATTTA 49982
Query 8794 ATG 8796
|||
Sbjct 49981 ATG 49979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 42107190364802
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |