Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_013135.1 Length=12390 Score E Sequences producing significant alignments: (Bits) Value seq2708 156 3e-34 >seq2708 Length=213413 Score = 156 bits (172), Expect = 3e-34 Identities = 231/322 (72%), Gaps = 4/322 (1%) Strand=Plus/Minus Query 7626 TTAATGTCTTGGGACATCCGCGACTACTTTGTCATGACTGAATACCTCATTAAGACCCAC 7685 || ||||| ||| | || || || |||||||| |||||||||||||| || ||| || Sbjct 50320 TTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCAT 50261 Query 7686 TTTGTCCCCTTATTCAAAGGGCTGACCATGGCAGATGACCTCACAACAGTAATTGGCAAG 7745 ||||| || || ||||| || ||||| |||| ||||| || || ||||| || || Sbjct 50260 TTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAA 50201 Query 7746 ATATTGGAGAACTCTCGGGGTCAGGGAGAGGCAGACTATGAGAACT-TGACTATCACTGA 7804 || | |||| ||| || || |||| | || ||||| |||| | || || | | Sbjct 50200 ATGATTGAGAGCTCGGCTGGACAAGGAGGATCTGATTATGA-AACTGTCACCATTGCGAA 50142 Query 7805 TCACATTGACTATGAAAAATGGAACAACCACCAGAGAGGGGAAGCCAACA-ATCCAATCT 7863 ||| | ||||| || |||||||| || || ||||| | || ||||| | ||| | | Sbjct 50141 TCATGTAGACTACGAGAAATGGAATAATCATCAGAG-GAAAGAGTCAACAGACCCAGTAT 50083 Query 7864 TCTTGGTCATGGGGAAGTTCTTGGGTTACCCGCATCTAATAGAGCGTACACATGAGATAT 7923 || ||| |||||| | ||| | || || || || |||| || ||||||||||||| Sbjct 50082 TCAGGGTTATGGGGCAATTCCTTGGCTATCCTCACTTAATCACTCGGACACATGAGATAT 50023 Query 7924 TTGAAAAATCATGGATTTATTA 7945 ||||||| |||||||| ||||| Sbjct 50022 TTGAAAAGTCATGGATCTATTA 50001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39531329676336