Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_020803.1
Length=11487
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 113 3e-21
>seq2708
Length=213413
Score = 113 bits (124), Expect = 3e-21
Identities = 188/270 (70%), Gaps = 4/270 (1%)
Strand=Plus/Minus
Query 6698 TGATGTCATGGGAATTGAGAGAATATTTTGTAATAACAGAATACTTAATCAAGACACACT 6757
||||||| ||| | | |||| || ||||| || || |||||| | |||||| || |
Sbjct 50319 TGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATT 50260
Query 6758 ATGTGCCCTTATTCAAAGGGTTAACCATGGCAGATGATATGACGGAAGT--TGTAAAGAA 6815
||| || || ||||| || | || |||| |||||| | || ||| ||| || |
Sbjct 50259 TTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAA--A 50202
Query 6816 AATGCTAGAAAGGAGTCAAGGGCAGGGAGAAGATGACTACGAGCACATCAGCATTGCCAA 6875
|||| | || || || || |||| | ||| || || ||| |||||| ||
Sbjct 50201 AATGATTGAGAGCTCGGCTGGACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAA 50142
Query 6876 CCACATTGACTATGAGAAGTGGAATAATCATCAGAGAAAGGAATCAAATGGGCCTGTGTT 6935
|| | ||||| ||||| ||||||||||||||||| || || |||| | || || ||
Sbjct 50141 TCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATT 50082
Query 6936 CAGAGTCATGGGACAATTCCTAGGATATCC 6965
||| || ||||| |||||||| || |||||
Sbjct 50081 CAGGGTTATGGGGCAATTCCTTGGCTATCC 50052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36641837147784
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |