Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_020805.1 Length=11120 Score E Sequences producing significant alignments: (Bits) Value seq2708 178 9e-41 >seq2708 Length=213413 Score = 178 bits (196), Expect = 9e-41 Identities = 238/331 (72%), Gaps = 0/331 (0%) Strand=Plus/Minus Query 6333 TGAAGATTGCAGGTAGATTTTTCTCATTGATGTCTTGGAAGCTTAGGGAATACTTTGTTG 6392 |||||| | ||| |||||||| |||||||||| ||| || || | || |||||||| Sbjct 50346 TGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGA 50287 Query 6393 TCACAGAGTATTTGATCAAGACTCACTTTGTGCCATTGTTCCATGGGCTGACCATGGCTG 6452 | || || || |||||||| || ||||| ||||||||| | || ||||| |||||| Sbjct 50286 TGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTG 50227 Query 6453 ATGATATGACAGCAGTGATCAAAAAGATGCTGGAAAGCTCGTCTGGTCAAGGGCTAACAA 6512 ||||| | || ||||||| ||| ||| | || |||||| |||| ||||| | | Sbjct 50226 ATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATCTG 50167 Query 6513 ACTACGACAGCGTTTGTATTGCAAATCATATTGACTATGAAAAATGGAATAATCATCAAC 6572 | || || | || ||||| |||||| | ||||| || ||||||||||||||||| Sbjct 50166 ATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGA 50107 Query 6573 GAAAATTGTCCAATGGACCTGTGTTTAAAGTCATGGGACAATTCTTGGGTTATCCAAATT 6632 | ||| ||| | | || || || | || ||||| |||||| | || ||||| | | Sbjct 50106 GGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCCTCACT 50047 Query 6633 TGATATACCGGACACATGAGTTTTTTGAGAA 6663 | || |||||||||||| | ||||| || Sbjct 50046 TAATCACTCGGACACATGAGATATTTGAAAA 50016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35467480826656