Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_020805.1
Length=11120
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 178 9e-41
>seq2708
Length=213413
Score = 178 bits (196), Expect = 9e-41
Identities = 238/331 (72%), Gaps = 0/331 (0%)
Strand=Plus/Minus
Query 6333 TGAAGATTGCAGGTAGATTTTTCTCATTGATGTCTTGGAAGCTTAGGGAATACTTTGTTG 6392
|||||| | ||| |||||||| |||||||||| ||| || || | || ||||||||
Sbjct 50346 TGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGA 50287
Query 6393 TCACAGAGTATTTGATCAAGACTCACTTTGTGCCATTGTTCCATGGGCTGACCATGGCTG 6452
| || || || |||||||| || ||||| ||||||||| | || ||||| ||||||
Sbjct 50286 TGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTG 50227
Query 6453 ATGATATGACAGCAGTGATCAAAAAGATGCTGGAAAGCTCGTCTGGTCAAGGGCTAACAA 6512
||||| | || ||||||| ||| ||| | || |||||| |||| ||||| | |
Sbjct 50226 ATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATCTG 50167
Query 6513 ACTACGACAGCGTTTGTATTGCAAATCATATTGACTATGAAAAATGGAATAATCATCAAC 6572
| || || | || ||||| |||||| | ||||| || |||||||||||||||||
Sbjct 50166 ATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGA 50107
Query 6573 GAAAATTGTCCAATGGACCTGTGTTTAAAGTCATGGGACAATTCTTGGGTTATCCAAATT 6632
| ||| ||| | | || || || | || ||||| |||||| | || ||||| | |
Sbjct 50106 GGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCCTCACT 50047
Query 6633 TGATATACCGGACACATGAGTTTTTTGAGAA 6663
| || |||||||||||| | ||||| ||
Sbjct 50046 TAATCACTCGGACACATGAGATATTTGAAAA 50016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35467480826656
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |