Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_020806.1
Length=11088
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 136 3e-28
>seq2708
Length=213413
Score = 136 bits (150), Expect = 3e-28
Identities = 264/388 (68%), Gaps = 4/388 (1%)
Strand=Plus/Minus
Query 6276 AGGGAAGGAAAGAGAATTGAAGATAGCCGGGAGATTTTTCTCACTAATGTCGTGGAAGCT 6335
|| |||||| | || ||||||| || |||||||| || | ||||| ||| || |
Sbjct 50363 AGCGAAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGAT 50304
Query 6336 GAGAGAATATTTTGTGATCACGGAATATCTAATTAAGACACACTTTGTACCACTTTTCCA 6395
|||| || |||||||| || ||||| || || ||| || ||||| ||| | ||| |
Sbjct 50303 TCGAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAA 50244
Query 6396 CGGCTTGACAATGGCAGATGACATGACGGCTGTAATAAAGAAAATGTTGGAAAGTTCAAG 6455
|| |||| |||| ||||| | || | || || |||||| | || || ||
Sbjct 50243 GGGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGC 50184
Query 6456 TGGACAGGGTCTAAAAGATTATTCGGCAGTATGCATTGCAAACCACATTGACTATGAGAA 6515
|||||| || | |||||| | || |||||| || || | ||||| |||||
Sbjct 50183 TGGACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAA 50124
Query 6516 ATGGAACAACCATCAGAGGAAACGGTCAAATGAACCAATTTTTAAAGTCATGGGTCAATT 6575
|||||| || |||||||||||| ||||| || ||| | || | || ||||| |||||
Sbjct 50123 ATGGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATT 50064
Query 6576 CTTGGGGTTTCCCAACCTTATATCGAGGACTCATGAATTCTTTGAGAAAAGTC--TCATC 6633
| | || | ||| || | || | |||| ||||| | ||| |||||||| |||
Sbjct 50063 CCTTGGCTATCCTCACTTAATCACTCGGACACATGAGATATTT--GAAAAGTCATGGATC 50006
Query 6634 TATTATAATGGAAGGCCTGATTTGATGA 6661
||||| || ||| |||||| ||||
Sbjct 50005 TATTACAACAATAGGGGTGATTTAATGA 49978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35365084635168
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |