Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_022580.1 Length=12676 Score E Sequences producing significant alignments: (Bits) Value seq2708 100 2e-17 >seq2708 Length=213413 Score = 100 bits (110), Expect = 2e-17 Identities = 163/235 (69%), Gaps = 0/235 (0%) Strand=Plus/Minus Query 7759 GATTTTTCTCTTTAATGTCATGGGAATTACGGGAATATTTTGTTGTAACAGAATACTTAA 7818 ||||||| | || ||||| ||| | | || || || ||||| | || |||||| | | Sbjct 50331 GATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAATACCTGA 50272 Query 7819 TTAAAGAGCATTTTGTTCCATTGTTCCATGGATTAACGATGGCAGATGATTTAACCACTG 7878 | || ||||||||||||||||||| | || | || |||| |||||| ||||||| | Sbjct 50271 TCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAACCACAG 50212 Query 7879 TGATGAAAAAGATGCTGGACAATACAATCGGCCAAGGTGGCAAGGACTACACACAAATTT 7938 ||||| ||| ||| | || | | || ||||| || || || | | Sbjct 50211 TGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATCTGATTATGAAACTGTCA 50152 Query 7939 GCATAGCCAATCACTTTGATTATGAGAAATGGAACAATCATCAGAGGAAGGAATC 7993 ||| || ||||| | || || ||||||||||| |||||||||||||| || || Sbjct 50151 CCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAGTC 50097 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 40446495637760