Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_022580.1
Length=12676
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 100 2e-17
>seq2708
Length=213413
Score = 100 bits (110), Expect = 2e-17
Identities = 163/235 (69%), Gaps = 0/235 (0%)
Strand=Plus/Minus
Query 7759 GATTTTTCTCTTTAATGTCATGGGAATTACGGGAATATTTTGTTGTAACAGAATACTTAA 7818
||||||| | || ||||| ||| | | || || || ||||| | || |||||| | |
Sbjct 50331 GATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAATACCTGA 50272
Query 7819 TTAAAGAGCATTTTGTTCCATTGTTCCATGGATTAACGATGGCAGATGATTTAACCACTG 7878
| || ||||||||||||||||||| | || | || |||| |||||| ||||||| |
Sbjct 50271 TCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAACCACAG 50212
Query 7879 TGATGAAAAAGATGCTGGACAATACAATCGGCCAAGGTGGCAAGGACTACACACAAATTT 7938
||||| ||| ||| | || | | || ||||| || || || | |
Sbjct 50211 TGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATCTGATTATGAAACTGTCA 50152
Query 7939 GCATAGCCAATCACTTTGATTATGAGAAATGGAACAATCATCAGAGGAAGGAATC 7993
||| || ||||| | || || ||||||||||| |||||||||||||| || ||
Sbjct 50151 CCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAGTC 50097
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 40446495637760
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |