Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_022581.1
Length=11806
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 107 1e-19
>seq2708
Length=213413
Score = 107 bits (118), Expect = 1e-19
Identities = 197/287 (69%), Gaps = 4/287 (1%)
Strand=Plus/Minus
Query 6846 GGACGGTTCTTTTCTCTAATGTCCTGGGAATTGAGGGAGTATTTTGTAATAACTGAATAC 6905
||| | || ||| | | ||||||||| | | | ||||| ||||| || |||||||||
Sbjct 50335 GGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAATAC 50276
Query 6906 CTGATCAAAACTCATTACGTCCCTCTCTTTAAAGGATTGACCATGGCAGATGACATGACG 6965
|||||||| |||| || || | || || || |||| |||| ||||| | ||
Sbjct 50275 CTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAACC 50216
Query 6966 GAGGTC--GTCAAGAAGATGTTAGAAAGAAGTCAAGGACAAGGAGAGGATGATTACGAGC 7023
|| ||||| || || | || || |||||||||| |||||| ||
Sbjct 50215 ACAGTGATGTCAAAAA--TGATTGAGAGCTCGGCTGGACAAGGAGGATCTGATTATGAAA 50158
Query 7024 ACGTCAGCATTGCCAACCACATTGATTATGAAAAATGGAACAACCATCAAAGGAAAGAGT 7083
|||| |||||| || || | || || || |||||||| || ||||| ||||||||||
Sbjct 50157 CTGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAGT 50098
Query 7084 CTAACGGCCCGGTGTTCAGAGTCATGGGACAATTTCTGGGGTACCCT 7130
| | | ||| || ||||| || ||||| ||||| || || || |||
Sbjct 50097 CAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCCT 50051
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 37662599181680
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |