Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_022755.1 Length=10692 Score E Sequences producing significant alignments: (Bits) Value seq2708 168 5e-38 >seq2708 Length=213413 Score = 168 bits (186), Expect = 5e-38 Identities = 246/348 (71%), Gaps = 0/348 (0%) Strand=Plus/Minus Query 5958 AGCAAAGGAACGTGAGTTGAAAACCGTAGGTCGGTTCTTCTCTCTAATGTCTTGGAAATT 6017 ||| ||||| || |||||||| || |||| | || || | | ||||| ||| | | Sbjct 50363 AGCGAAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGAT 50304 Query 6018 AAGAGAATACTTCGTGATAACAGAGTATCTCATAAAGACTCATTTTGTTCCTTTGTTTCA 6077 |||| ||||| ||||| || || || || || ||| ||||||||||| ||||| | Sbjct 50303 TCGAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAA 50244 Query 6078 CGGGCTCACCATGGCGGACGACCTGACAGCTGTTATGAAGAAAATGATGGAGTCATCTTC 6137 || || || |||| || || || || | || ||| |||||||| ||| || | Sbjct 50243 GGGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGC 50184 Query 6138 AGGACAAGGCGCCTCCGACTATGATGCCATTGCCATTGCGAACCATATTGACTATGAAAA 6197 |||||||| | || || ||||| | | |||||||||| ||| | ||||| || || Sbjct 50183 TGGACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAA 50124 Query 6198 ATGGAATAACCATCAACGGAAAGAATCCAATGGTCCTGTCTTCAGAGTCATGGGTCAGTT 6257 ||||||||| ||||| ||||||| || | | || || ||||| || ||||| || || Sbjct 50123 ATGGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATT 50064 Query 6258 CCTAGGGTATCCAAATTTAATTTACCGGACGCATGAGTTTTTTGAGAA 6305 ||| || ||||| | ||||| ||||| |||||| | ||||| || Sbjct 50063 CCTTGGCTATCCTCACTTAATCACTCGGACACATGAGATATTTGAAAA 50016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 34097931765504