Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_024473.1
Length=11123
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 114 9e-22
>seq2708
Length=213413
Score = 114 bits (126), Expect = 9e-22
Identities = 207/294 (70%), Gaps = 9/294 (3%)
Strand=Plus/Minus
Query 6247 GGGAGATTCTTCTCATTGATGTCATGG-AGATTAAGGGAATATTTTGTGATCACGGAGTA 6305
|| ||||| || |||||||||| ||| ||||| | || || |||||||| || || ||
Sbjct 50335 GGAAGATTTTTTGCATTGATGTCCTGGCAGATTC-GAGAGTACTTTGTGATGACTGAATA 50277
Query 6306 CTTAATCAAAACATACTACGTTCCCTTGTTTAAGGGGTTAACTATGGCAGATGACCTCAC 6365
| | ||||| | | ||||| ||||| ||||| | ||| |||| ||||| || ||
Sbjct 50276 CCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAAC 50217
Query 6366 ATCGGTGATTAAGAAGATGATGGACAGTTCATCAGGTCAAGG--GCTCGATGATTATTCA 6423
| ||||| || ||||| || || || | || ||||| | || ||||||| |
Sbjct 50216 CACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATC--TGATTATGAA 50159
Query 6424 TCAGTTTGTTTGGCTAACCATATTGACTACGAGAAGTGGAATAACCATCAAAGAAAGGAA 6483
| || | || || ||| | ||||||||||| |||||||| ||||| || || ||
Sbjct 50158 ACTGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAG 50099
Query 6484 TCTAATGGTCCCA-TCTTCAGAGTCATGGGACAGTTTCTGGGTTATCCATCACT 6536
|| || | |||| | ||||| || ||||| || || || || ||||| |||||
Sbjct 50098 TC-AACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCC-TCACT 50047
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35477080469608
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |