Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_025255.1 Length=11135 Score E Sequences producing significant alignments: (Bits) Value seq2708 152 4e-33 >seq2708 Length=213413 Score = 152 bits (168), Expect = 4e-33 Identities = 223/313 (71%), Gaps = 2/313 (1%) Strand=Plus/Minus Query 6281 AGGGAAAGAGAGAGAATTAAAAATTGCGGGAAGATTCTTTTCTTTGATGTCCTGGAAGCT 6340 || ||| ||| | || || || | | |||||||| ||| | |||||||||||| || | Sbjct 50363 AGCGAAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGAT 50304 Query 6341 CAGAGAGTATTTTGTCATCACTGAGTATTTGATTAAGACGCACTTTGTCCCGATGTTTAA 6400 ||||||| ||||| || ||||| || |||| ||| ||| ||||| || |||| || Sbjct 50303 TCGAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAA 50244 Query 6401 AGGGTTGACCATGGCGGATGACTTGACAGCGGTGATAAAGAAGATGATGGACACATCTTC 6460 || |||| |||| ||||| | || | ||||| || ||||| || | || | Sbjct 50243 GGGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGC 50184 Query 6461 AGGACAAGGCTTAGATAATTATGAATCCATTTGTATAGCCAACCATATTGACTATGAGAA 6520 |||||||| | | |||||||| | | || || || ||| | ||||| ||||| Sbjct 50183 TGGACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAA 50124 Query 6521 GTGGAACAATCATCAAAGAAAAGAGTCGAACGGGCCC-GTGTTCAAGGTGATGGGTCAAT 6579 ||||| |||||||| || |||||||| ||| | ||| || |||| ||| ||||| |||| Sbjct 50123 ATGGAATAATCATCAGAGGAAAGAGTC-AACAGACCCAGTATTCAGGGTTATGGGGCAAT 50065 Query 6580 TCTTGGGATATCC 6592 || | || ||||| Sbjct 50064 TCCTTGGCTATCC 50052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35515479041416