Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_025341.1
Length=11139
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 145 5e-31
>seq2708
Length=213413
Score = 145 bits (160), Expect = 5e-31
Identities = 249/359 (69%), Gaps = 2/359 (1%)
Strand=Plus/Minus
Query 6308 AGGACGGTTCTTTTCACTCATGTCGTGGAAACTAAGAGAATATTTTGTTGTCACAGAATA 6367
|||| | || ||| || | ||||| ||| | | |||| || ||||| | || |||||
Sbjct 50336 AGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAATA 50277
Query 6368 CCTAATCAAAGAACATTTCGTCCCTCTCTTCAATGGATTGACTATGGCGGATGACATGAC 6427
||| ||||| ||||| || || | ||||| || ||||| |||| ||||| | ||
Sbjct 50276 CCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAAC 50217
Query 6428 CACCGTAATATCAAAACTAATGGATCGCACTCAGGGCCAAGGAGGAGAGGACTACACCCA 6487
||| || || |||||| | || || || | || ||||||||| || ||
Sbjct 50216 CACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATCTGATTATGAAAC 50157
Query 6488 AGTTTGCATTGCTAATCATATCGATTATGAAAAGTGGAACAATCATCAGAG-AAAGCGTG 6546
|| |||||| |||||| | || || || || ||||| ||||||||||| |||| ||
Sbjct 50156 TGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAGT- 50098
Query 6547 CAACCGGACCTGTGTTCATAGTCATGGGACAATTCCTTGGATTTCCTAAACTGATCTATA 6606
|||| | || || |||| || ||||| ||||||||||| | |||| | | ||| |
Sbjct 50097 CAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCCTCACTTAATCACTC 50038
Query 6607 GAACACATGAGTTCTTTGAATCTAGCTGGGTGTATTACAATGCTAGACCTGATTTAATG 6665
| ||||||||| | |||||| ||| | |||||||| ||| ||||||||||
Sbjct 50037 GGACACATGAGATATTTGAAAAGTCATGGATCTATTACAACAATAGGGGTGATTTAATG 49979
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35528278565352
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |