Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_025353.1 Length=11070 Score E Sequences producing significant alignments: (Bits) Value seq2708 138 8e-29 >seq2708 Length=213413 Score = 138 bits (152), Expect = 8e-29 Identities = 225/322 (70%), Gaps = 4/322 (1%) Strand=Plus/Minus Query 6282 GGCAGAtttttttCTCTTATGTCCTGGAAGTTGAGAGAATATTTCGTCATTACGGAGTAT 6341 || ||||||||| | | ||||||||| || | |||| || || || || || || || Sbjct 50335 GGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAATAC 50276 Query 6342 TTAATAAAGACACATTTTGTCCCCATGTTTAAGGGATTGACAATGGCAGATGATCTAACA 6401 | || ||| |||||||| || |||| ||||| |||| |||| ||||||||||| Sbjct 50275 CTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAACC 50216 Query 6402 GCTGTCATAAAGAAAATGATGGATACCTCATCAGGACAGGGTTTGGATA--ATTACGACT 6459 | || || |||||||| || | ||| | ||||| || |||| |||| || Sbjct 50215 ACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGA--GGATCTGATTATGAAA 50158 Query 6460 CAATTTGCATAGCCAATCACATTGATTATGAGAAGTGGAACAATCACCAGCGGAAAGAAT 6519 | | ||| || ||||| | || || ||||| ||||| ||||| ||| ||||||| | Sbjct 50157 CTGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAGT 50098 Query 6520 CCAATGGTCCTGTTTTTAGGGTAATGGGACAATTCCTTGGCTACCCCAATTTGATTGAAC 6579 | | | || || || ||||| ||||| |||||||||||||| || | || || | Sbjct 50097 CAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCCTCACTTAATCACTC 50038 Query 6580 GCACCCATGAATTCTTTGAAAA 6601 | || ||||| | |||||||| Sbjct 50037 GGACACATGAGATATTTGAAAA 50016 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35307486777456