Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_025356.1 Length=11097 Score E Sequences producing significant alignments: (Bits) Value seq2708 140 2e-29 >seq2708 Length=213413 Score = 140 bits (154), Expect = 2e-29 Identities = 206/288 (72%), Gaps = 8/288 (3%) Strand=Plus/Minus Query 6343 GGAAGATTCTTTTCCCTGATGTCCTGGCAACTGAGAGAATATTTTGTCATCACCGAGTAC 6402 |||||||| ||| | ||||||||||||| | |||| || ||||| || || || ||| Sbjct 50335 GGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAATAC 50276 Query 6403 TTAATAAAGACTCATTATGTACCATTATTCAAAGGACTCACAATGGCGGATGATCTGACA 6462 | || ||| |||| ||| ||||| ||||| || || || |||| |||||||| || Sbjct 50275 CTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAACC 50216 Query 6463 TCAGT--TGTAAAGAAGATGTTGGACAACACGAATGGACAAGGACTGGAT--GATTATTC 6518 |||| ||| || || || | || | | || |||||||||| |||| |||||| Sbjct 50215 ACAGTGATGTCAAAAA--TGATTGAGAGCTCGGCTGGACAAGGA--GGATCTGATTATGA 50160 Query 6519 ATCGATTTGCATCGCCAATCACATCGACTATGAGAAGTGGAATAATCATCAGAGAAAAGA 6578 | | | ||| || ||||| | ||||| ||||| ||||||||||||||||| ||||| Sbjct 50159 AACTGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGA 50100 Query 6579 ATCCAATGGGCCTGTGTTTCGAGTCATGGGGCAGTTTTTGGGTTATCC 6626 || | | || || || | || |||||||| || | || ||||| Sbjct 50099 GTCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCC 50052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35393883564024