Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_025362.1 Length=12240 Score E Sequences producing significant alignments: (Bits) Value seq2708 156 3e-34 >seq2708 Length=213413 Score = 156 bits (172), Expect = 3e-34 Identities = 239/338 (71%), Gaps = 2/338 (1%) Strand=Plus/Minus Query 7477 TAGGAAGAtttttttCACTTATGTCTTGGGAACTGAGGGAGTATTTTGTATCTACTGAAT 7536 |||||||||||||| || | ||||| ||| | | | ||||| ||||| ||||||| Sbjct 50337 TAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAAT 50278 Query 7537 ACTTGATTAAGAAGCATTTTGTACCATTGTTTAAAGGCTTGACTATGGCTGATGGATTGA 7596 || |||| ||| ||||||||| |||||||| || || ||||| ||||||||| | | Sbjct 50277 ACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAA 50218 Query 7597 TGACGGTAACTAAGAAAATGTTGGAGTCATCAATGGGACAGGG-GAATCCTGATTATGAG 7655 || || | |||||| | ||| || ||||| || | ||| ||||||||| Sbjct 50217 CCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATC-TGATTATGAA 50159 Query 7656 ACTGTGTCCATTGCTAACCATGTCGATTATGAGAAGTGGAACAACCACCAAAGAAGATTG 7715 ||||| ||||||| || ||||| || || ||||| ||||| || || || || | | | Sbjct 50158 ACTGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAG 50099 Query 7716 TCAAATCAGGCAGTCTTTAGAGTCATGGGACAATTTTTAGGTTACCCAAATTTGATAAGT 7775 |||| | |||| || || || ||||| ||||| | || || || | || || | | Sbjct 50098 TCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCCTCACTTAATCACT 50039 Query 7776 CGCACCCATGAATTTTTTGAGAAAAGCTGGATCTATTA 7813 || || ||||| | ||||| || ||||||||||| Sbjct 50038 CGGACACATGAGATATTTGAAAAGTCATGGATCTATTA 50001 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 39051347528736