Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_025362.1
Length=12240
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 156 3e-34
>seq2708
Length=213413
Score = 156 bits (172), Expect = 3e-34
Identities = 239/338 (71%), Gaps = 2/338 (1%)
Strand=Plus/Minus
Query 7477 TAGGAAGAtttttttCACTTATGTCTTGGGAACTGAGGGAGTATTTTGTATCTACTGAAT 7536
|||||||||||||| || | ||||| ||| | | | ||||| ||||| |||||||
Sbjct 50337 TAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAAT 50278
Query 7537 ACTTGATTAAGAAGCATTTTGTACCATTGTTTAAAGGCTTGACTATGGCTGATGGATTGA 7596
|| |||| ||| ||||||||| |||||||| || || ||||| ||||||||| | |
Sbjct 50277 ACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAA 50218
Query 7597 TGACGGTAACTAAGAAAATGTTGGAGTCATCAATGGGACAGGG-GAATCCTGATTATGAG 7655
|| || | |||||| | ||| || ||||| || | ||| |||||||||
Sbjct 50217 CCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATC-TGATTATGAA 50159
Query 7656 ACTGTGTCCATTGCTAACCATGTCGATTATGAGAAGTGGAACAACCACCAAAGAAGATTG 7715
||||| ||||||| || ||||| || || ||||| ||||| || || || || | | |
Sbjct 50158 ACTGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAG 50099
Query 7716 TCAAATCAGGCAGTCTTTAGAGTCATGGGACAATTTTTAGGTTACCCAAATTTGATAAGT 7775
|||| | |||| || || || ||||| ||||| | || || || | || || | |
Sbjct 50098 TCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCCTCACTTAATCACT 50039
Query 7776 CGCACCCATGAATTTTTTGAGAAAAGCTGGATCTATTA 7813
|| || ||||| | ||||| || |||||||||||
Sbjct 50038 CGGACACATGAGATATTTGAAAAGTCATGGATCTATTA 50001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 39051347528736
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |