Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_025364.1 Length=11019 Score E Sequences producing significant alignments: (Bits) Value seq2708 118 7e-23 >seq2708 Length=213413 Score = 118 bits (130), Expect = 7e-23 Identities = 197/285 (69%), Gaps = 0/285 (0%) Strand=Plus/Minus Query 6215 AGGTAGATTTTTCTCTCTCATGTCTTGGAAATTGAGGGAATACTTTGTGATCACAGAGTA 6274 ||| |||||||| | | ||||| ||| | | | || ||||||||||| || || || Sbjct 50336 AGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAATA 50277 Query 6275 CTTAATTAAGACACATTTTGTGCCTCTATTTCATGGTCTCACCATGGCTGACGACATGAC 6334 | | || ||| |||||||| || | || | ||||| || ||||||| || | || Sbjct 50276 CCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAAC 50217 Query 6335 TGCAGTCATCAAAAAGATGTTGGAAAGCTCATCTGGACAAGGTTTGTTAGATTACTCAGC 6394 |||| || ||| ||| | || ||||| |||||||||| | ||||| | | Sbjct 50216 CACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATCTGATTATGAAAC 50157 Query 6395 GGTATGCCTGGCCAACCATATAGATTATGAAAAATGGAACAATCACCAGCGAAAATTGTC 6454 || | | || || ||| |||| || || |||||||| ||||| ||| | ||| ||| Sbjct 50156 TGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAGTC 50097 Query 6455 AAACGGTCCTGTCTTCAAGGTCATGGGCCAATTCCTTGGGTTTCC 6499 || | || || |||| ||| ||||| ||||||||||| | ||| Sbjct 50096 AACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCC 50052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35144292847272