Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_025371.1 Length=11082 Score E Sequences producing significant alignments: (Bits) Value seq2708 154 1e-33 >seq2708 Length=213413 Score = 154 bits (170), Expect = 1e-33 Identities = 219/308 (71%), Gaps = 0/308 (0%) Strand=Plus/Minus Query 6308 AAAGAGAGAGAGTTAAAGATCGCCGGAAGGTTCTTTTCACTGATGTCTTGGCAGTTGAGA 6367 || ||| | ||||| |||| ||||| || ||| || ||||||| |||||| | || Sbjct 50359 AAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGA 50300 Query 6368 GAGTACTTTGTGATAACGGAATATCTGATTAAGACCCATTATGTTCCACTATTTAAAGGA 6427 |||||||||||||| || ||||| ||||| ||| |||| ||||||| | || || || Sbjct 50299 GAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGT 50240 Query 6428 TTGACTATGGCAGATGACCTCACATCAGTCGTGAAGAAGATGTTGGACAACACAAACGGA 6487 ||||| |||| ||||| || || |||| || || ||| | || | | | ||| Sbjct 50239 CTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGA 50180 Query 6488 CAAGGATTAGACGACTATTCATCGATTTGTATAGCGAATCACATTGATTACGAAAAATGG 6547 |||||| | || ||| | | | || |||||||| | || ||||| |||||| Sbjct 50179 CAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAAATGG 50120 Query 6548 AACAATCATCAGAGGAAAGAGTCAAATGGACCGGTCTTTCGCGTCATGGGACAATTTTTG 6607 || |||||||||||||||||||||| | || || || | || ||||| ||||| | Sbjct 50119 AATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTT 50060 Query 6608 GGATATCC 6615 || ||||| Sbjct 50059 GGCTATCC 50052 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35345885349264