Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_025371.1
Length=11082
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 154 1e-33
>seq2708
Length=213413
Score = 154 bits (170), Expect = 1e-33
Identities = 219/308 (71%), Gaps = 0/308 (0%)
Strand=Plus/Minus
Query 6308 AAAGAGAGAGAGTTAAAGATCGCCGGAAGGTTCTTTTCACTGATGTCTTGGCAGTTGAGA 6367
|| ||| | ||||| |||| ||||| || ||| || ||||||| |||||| | ||
Sbjct 50359 AAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGA 50300
Query 6368 GAGTACTTTGTGATAACGGAATATCTGATTAAGACCCATTATGTTCCACTATTTAAAGGA 6427
|||||||||||||| || ||||| ||||| ||| |||| ||||||| | || || ||
Sbjct 50299 GAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGT 50240
Query 6428 TTGACTATGGCAGATGACCTCACATCAGTCGTGAAGAAGATGTTGGACAACACAAACGGA 6487
||||| |||| ||||| || || |||| || || ||| | || | | | |||
Sbjct 50239 CTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGA 50180
Query 6488 CAAGGATTAGACGACTATTCATCGATTTGTATAGCGAATCACATTGATTACGAAAAATGG 6547
|||||| | || ||| | | | || |||||||| | || ||||| ||||||
Sbjct 50179 CAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAAATGG 50120
Query 6548 AACAATCATCAGAGGAAAGAGTCAAATGGACCGGTCTTTCGCGTCATGGGACAATTTTTG 6607
|| |||||||||||||||||||||| | || || || | || ||||| ||||| |
Sbjct 50119 AATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTT 50060
Query 6608 GGATATCC 6615
|| |||||
Sbjct 50059 GGCTATCC 50052
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35345885349264
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |