Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_025376.1
Length=11096
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 152 4e-33
>seq2708
Length=213413
Score = 152 bits (168), Expect = 4e-33
Identities = 243/344 (71%), Gaps = 6/344 (2%)
Strand=Plus/Minus
Query 6318 AAGGAGAGAGAATTGAAAATTGCCGGAAGATTTTTCTCCCTAATGTCATGGCAGTTAAGG 6377
|||||| | || ||||| | | ||||||||||| | | ||||| |||||| | |
Sbjct 50359 AAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGA 50300
Query 6378 GAGTACTTCGTCATCACAGAGTACTTGATCAAAACACACTATGTCCCGTTGTTCAAGGGA 6437
|||||||| || || || || ||| ||||||| || | ||| || |||||||||||
Sbjct 50299 GAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGT 50240
Query 6438 CTGACGATGGCAGATGACCTTACATCCGTTGTGAAGAAGATGTTGGACAACACAAATGGA 6497
||||| |||| ||||| || || | || || || ||| | || | | | ||||
Sbjct 50239 CTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGA 50180
Query 6498 CAAGGATTGGA--TGACTACTCCTCTATCTGTATTGCCAACCACATTGACTACGAAAAAT 6555
|||||| ||| ||| || || || ||||| || || | |||||||| ||||
Sbjct 50179 CAAGGA--GGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAAAT 50122
Query 6556 GGAATAATCATCAGAGGAAAGAGTCTAATGGTCCAGTGTTTCGAGTAATGGGACAGTTTC 6615
||||||||||||||||||||||||| | | ||||| || | || ||||| || || |
Sbjct 50121 GGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCC 50062
Query 6616 TAGGGTATCCTAGACTGTTTGA-AAGGACACATGAGTTCTTTGA 6658
| || |||||| ||| | | ||||||||||| | |||||
Sbjct 50061 TTGGCTATCCT-CACTTAATCACTCGGACACATGAGATATTTGA 50019
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35390683683040
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |