Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_025387.1
Length=11492
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 138 8e-29
>seq2708
Length=213413
Score = 138 bits (152), Expect = 8e-29
Identities = 218/308 (71%), Gaps = 6/308 (2%)
Strand=Plus/Minus
Query 6653 TTGATGTCATGGGAGCTCAGGGAGTACTTTGTGGTGACTGAGTATCTGATCAAGAAGCAT 6712
|||||||| ||| || | | |||||||||||| ||||||| || ||||||||| ||||
Sbjct 50320 TTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCAT 50261
Query 6713 TTTGTCCCTTTGTTTAAGGGGTTGGCCATGGCTGATGACCTGACAGAGGTGATAAAAAAG 6772
||||| || ||||| ||||| || | |||||||||| || || ||||| |||
Sbjct 50260 TTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAA 50201
Query 6773 ATGCTGGACAGTGCATATGGCCAGGGACTGGA--CGACTACAGTGCAGTGTGTATTGCCA 6830
||| | || || | ||| || ||| ||| || || | || ||||| |
Sbjct 50200 ATGATTGAGAGCTCGGCTGGACAAGGA--GGATCTGATTATGAAACTGTCACCATTGCGA 50143
Query 6831 ACCACATTGATTATGAGAAGTGGAACAACCACCAGAGGAAGGAGTCCAACAGA-TATGTA 6889
| || | || || ||||| ||||| || || |||||||| |||| ||||||| |||
Sbjct 50142 ATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAGT-CAACAGACCCAGTA 50084
Query 6890 TTCAGAGTTATGGGTCAATGTTTGGGGTACCCTAACTTGATTGAACGGACTCATGAGTTC 6949
||||| |||||||| |||| | || || ||| |||| || ||||| |||||| |
Sbjct 50083 TTCAGGGTTATGGGGCAATTCCTTGGCTATCCTCACTTAATCACTCGGACACATGAGATA 50024
Query 6950 TTTGAGAA 6957
||||| ||
Sbjct 50023 TTTGAAAA 50016
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 36657836552704
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |