Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_025394.1 Length=11103 Score E Sequences producing significant alignments: (Bits) Value seq2708 154 1e-33 >seq2708 Length=213413 Score = 154 bits (170), Expect = 1e-33 Identities = 264/377 (70%), Gaps = 22/377 (6%) Strand=Plus/Minus Query 6275 AGGGAAGGAAAGGGAGTTGAAGATCGCAGGTCGATTCTTTTCGTTAATGTCTTGG-AGAT 6333 || |||||| |||||||||||| ||| |||| ||| | || ||||| ||| |||| Sbjct 50363 AGCGAAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGAT 50304 Query 6334 TACGGGAATACTTTGTAATTACTGAGTATTTGATTAAAACACACTTTGTTCCGTTATTTC 6393 | || || |||||||| || ||||| || |||| || || |||||||| || || Sbjct 50303 T-CGAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCA 50245 Query 6394 ATGGATTGACTATGGCAGATGATATGACGGCTGTGATCaaaaaaaTGATGGAGAGTTCAT 6453 | || ||||| |||| |||||| | || | ||||| ||||||||| ||||| || Sbjct 50244 AGGGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGG 50185 Query 6454 CAGGTC----AGGGTCTCAACGATTATTCTTCAATATGTC----TGGCTAATCACATTGA 6505 | || | ||| ||| ||||| | || |||| | || ||||| | || Sbjct 50184 CTGGACAAGGAGGATCT----GATTA----TGAAACTGTCACCATTGCGAATCATGTAGA 50133 Query 6506 TTATGAGAAATGGAACAATCATCAGAGAAAAGAGTCAAATGGACCTGTTTTCCGTGTCAT 6565 || ||||||||||| ||||||||||| |||||||||| | || || ||| | || || Sbjct 50132 CTACGAGAAATGGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTAT 50073 Query 6566 GGGTCAGTTCTTGGGATTTCCTAACCTTATATCCAGGACTCATGAATTCTTTGAAAAAAG 6625 ||| || ||| | || | |||| || | || | |||| ||||| | |||| ||||| Sbjct 50072 GGGGCAATTCCTTGGCTATCCTCACTTAATCACTCGGACACATGAGATATTTG--AAAAG 50015 Query 6626 TC--TGATATATTACAA 6640 || ||| |||||||| Sbjct 50014 TCATGGATCTATTACAA 49998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35413082849928