Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_025396.1
Length=15442
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 123 2e-24
>seq2708
Length=213413
Score = 123 bits (136), Expect = 2e-24
Identities = 224/325 (69%), Gaps = 2/325 (1%)
Strand=Plus/Minus
Query 10657 GAGACTACTTTGTTGCAACTGAATACTTGATTAAGAAATATTATGTACCATTGTTTGAAG 10716
|||| |||||||| ||||||||| |||| ||| ||| ||| |||||||| | |
Sbjct 50301 GAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGG 50242
Query 10717 GACTTACAATGGCAGATGATTTGAACACTGTAATTAAAAAGATGCTGGACGTGTCATCCG 10776
| || || |||| |||||| | | ||| || || ||| ||| | || || | |
Sbjct 50241 GTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTG 50182
Query 10777 GTCAAGGAACAAGAAACTATGATTATGTATCCATAGCCAACAACATTGATTATGAGAAAT 10836
| |||||| | | ||||| ||| |||| || || | | || || |||||||
Sbjct 50181 GACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAAAT 50122
Query 10837 GGAATAATTATCAAAGGAAAGAATCAAATGGACCGGTATTCAGAGTAATGGGACAATTCC 10896
|||||||| |||| |||||||| |||| | || |||||||| || ||||| |||||||
Sbjct 50121 GGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCC 50062
Query 10897 TTGG-AATGGAAAATCTTATAGTTCGGACACATGAATTCTTTGAAAATAGTTTGGTCTAT 10955
|||| || | | | || |||||||||||| | |||||||| | | |||||
Sbjct 50061 TTGGCTATCCTCACT-TAATCACTCGGACACATGAGATATTTGAAAAGTCATGGATCTAT 50003
Query 10956 TATAACCAGCGAGCAGACTTAATGA 10980
|| ||| | | | || |||||||
Sbjct 50002 TACAACAATAGGGGTGATTTAATGA 49978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 49294115629590
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |