Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_025396.1 Length=15442 Score E Sequences producing significant alignments: (Bits) Value seq2708 123 2e-24 >seq2708 Length=213413 Score = 123 bits (136), Expect = 2e-24 Identities = 224/325 (69%), Gaps = 2/325 (1%) Strand=Plus/Minus Query 10657 GAGACTACTTTGTTGCAACTGAATACTTGATTAAGAAATATTATGTACCATTGTTTGAAG 10716 |||| |||||||| ||||||||| |||| ||| ||| ||| |||||||| | | Sbjct 50301 GAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGG 50242 Query 10717 GACTTACAATGGCAGATGATTTGAACACTGTAATTAAAAAGATGCTGGACGTGTCATCCG 10776 | || || |||| |||||| | | ||| || || ||| ||| | || || | | Sbjct 50241 GTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTG 50182 Query 10777 GTCAAGGAACAAGAAACTATGATTATGTATCCATAGCCAACAACATTGATTATGAGAAAT 10836 | |||||| | | ||||| ||| |||| || || | | || || ||||||| Sbjct 50181 GACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAAAT 50122 Query 10837 GGAATAATTATCAAAGGAAAGAATCAAATGGACCGGTATTCAGAGTAATGGGACAATTCC 10896 |||||||| |||| |||||||| |||| | || |||||||| || ||||| ||||||| Sbjct 50121 GGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCC 50062 Query 10897 TTGG-AATGGAAAATCTTATAGTTCGGACACATGAATTCTTTGAAAATAGTTTGGTCTAT 10955 |||| || | | | || |||||||||||| | |||||||| | | ||||| Sbjct 50061 TTGGCTATCCTCACT-TAATCACTCGGACACATGAGATATTTGAAAAGTCATGGATCTAT 50003 Query 10956 TATAACCAGCGAGCAGACTTAATGA 10980 || ||| | | | || ||||||| Sbjct 50002 TACAACAATAGGGGTGATTTAATGA 49978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 49294115629590