Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_025400.1 Length=15444 Score E Sequences producing significant alignments: (Bits) Value seq2708 125 7e-25 >seq2708 Length=213413 Score = 125 bits (138), Expect = 7e-25 Identities = 222/324 (69%), Gaps = 0/324 (0%) Strand=Plus/Minus Query 10659 GAGACTACTTTGTTGCAACTGAATACTTGATCAAAAAATATTATGTACCATTATTCGAAG 10718 |||| |||||||| ||||||||| ||||||| ||| ||| ||||| ||| | | Sbjct 50301 GAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGG 50242 Query 10719 GACTTACAATGGCGGATGATTTGAATACAGTCATCAAAAAGATGCTGGATGTGTCCTCCG 10778 | || || |||| |||||| | | ||||| || ||| ||| | || || | | Sbjct 50241 GTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTG 50182 Query 10779 GCCAAGGAACAAGAAACTATGATTATGTGTCAATAGCTAACAATATTGATTATGAAAAAT 10838 | |||||| | | ||||| ||| | || || || || | || || || |||| Sbjct 50181 GACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAAAT 50122 Query 10839 GGAATAATTATCAAAGAAAAGAATCAAATGGACCAGTATTCAGAGTAATGGGGCAATTCC 10898 |||||||| |||| || ||||| |||| | ||||||||||| || ||||||||||||| Sbjct 50121 GGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCC 50062 Query 10899 TTGGAATGGAAAATTTGATAGTTCGGACACATGAATTCTTTGAAAATAGTTTGGTTTATT 10958 |||| | || || |||||||||||| | |||||||| | | | |||| Sbjct 50061 TTGGCTATCCTCACTTAATCACTCGGACACATGAGATATTTGAAAAGTCATGGATCTATT 50002 Query 10959 ATAACCAGCGAGCAGATTTAATGA 10982 | ||| | | | |||||||||| Sbjct 50001 ACAACAATAGGGGTGATTTAATGA 49978 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 49300515384946