Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_025400.1
Length=15444
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 125 7e-25
>seq2708
Length=213413
Score = 125 bits (138), Expect = 7e-25
Identities = 222/324 (69%), Gaps = 0/324 (0%)
Strand=Plus/Minus
Query 10659 GAGACTACTTTGTTGCAACTGAATACTTGATCAAAAAATATTATGTACCATTATTCGAAG 10718
|||| |||||||| ||||||||| ||||||| ||| ||| ||||| ||| | |
Sbjct 50301 GAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGG 50242
Query 10719 GACTTACAATGGCGGATGATTTGAATACAGTCATCAAAAAGATGCTGGATGTGTCCTCCG 10778
| || || |||| |||||| | | ||||| || ||| ||| | || || | |
Sbjct 50241 GTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGCTG 50182
Query 10779 GCCAAGGAACAAGAAACTATGATTATGTGTCAATAGCTAACAATATTGATTATGAAAAAT 10838
| |||||| | | ||||| ||| | || || || || | || || || ||||
Sbjct 50181 GACAAGGAGGATCTGATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGAAAT 50122
Query 10839 GGAATAATTATCAAAGAAAAGAATCAAATGGACCAGTATTCAGAGTAATGGGGCAATTCC 10898
|||||||| |||| || ||||| |||| | ||||||||||| || |||||||||||||
Sbjct 50121 GGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAATTCC 50062
Query 10899 TTGGAATGGAAAATTTGATAGTTCGGACACATGAATTCTTTGAAAATAGTTTGGTTTATT 10958
|||| | || || |||||||||||| | |||||||| | | | ||||
Sbjct 50061 TTGGCTATCCTCACTTAATCACTCGGACACATGAGATATTTGAAAAGTCATGGATCTATT 50002
Query 10959 ATAACCAGCGAGCAGATTTAATGA 10982
| ||| | | | ||||||||||
Sbjct 50001 ACAACAATAGGGGTGATTTAATGA 49978
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 49300515384946
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |