Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_025406.1
Length=11141
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 163 2e-36
>seq2708
Length=213413
Score = 163 bits (180), Expect = 2e-36
Identities = 242/341 (71%), Gaps = 4/341 (1%)
Strand=Plus/Minus
Query 6351 AGGTAGATTCTTTTCATTGATGTCATGGGAGTTACGAGAGTACTTTGTCATTACCGAATA 6410
||| ||||| ||| |||||||||| ||| || | |||||||||||||| || || |||||
Sbjct 50336 AGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAATA 50277
Query 6411 TTTAATAAAACACCATTTTGTACCTCTATTTAAGGGATTAACAATGGCAGATGATATGAC 6470
| || || |||||||| || | || ||||| | || |||| |||||| | ||
Sbjct 50276 CCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAAC 50217
Query 6471 AGAAGTGATCAAAAAGATGCTGGAAAGAAGTCAAGGCCAAGGAGAATTAGACTATCAACA 6530
|||||| ||| ||| | || || || ||||||| || || ||| ||
Sbjct 50216 CACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATCTGATTATGAAAC 50157
Query 6531 TGTGAGCATAGCGAACCATATAGATTATGAAAAGTGGAACAATCATCAAAGGAAAGAATC 6590
||| | ||| ||||| ||| |||| || || || ||||| |||||||| |||||||| ||
Sbjct 50156 TGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAGTC 50097
Query 6591 AAATGGACCAGTTTTCCGTGTGATGGGCCAATTCTTGGGCTATCCATCTTTGATAGAGAG 6650
|| | ||||| ||| | || ||||| |||||| | |||||||| || || |
Sbjct 50096 AACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCCTCACTTAATCACTCG 50037
Query 6651 AACGCATGAGTTCTTTGAGAAAAGTCTTG--TTTATTACAA 6689
|| |||||| | ||| |||||||| || | ||||||||
Sbjct 50036 GACACATGAGATATTT--GAAAAGTCATGGATCTATTACAA 49998
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 35534678327320
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |