Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25] 3,306 sequences; 462,505,359 total letters Query= NC_025406.1 Length=11141 Score E Sequences producing significant alignments: (Bits) Value seq2708 163 2e-36 >seq2708 Length=213413 Score = 163 bits (180), Expect = 2e-36 Identities = 242/341 (71%), Gaps = 4/341 (1%) Strand=Plus/Minus Query 6351 AGGTAGATTCTTTTCATTGATGTCATGGGAGTTACGAGAGTACTTTGTCATTACCGAATA 6410 ||| ||||| ||| |||||||||| ||| || | |||||||||||||| || || ||||| Sbjct 50336 AGGAAGATTTTTTGCATTGATGTCCTGGCAGATTCGAGAGTACTTTGTGATGACTGAATA 50277 Query 6411 TTTAATAAAACACCATTTTGTACCTCTATTTAAGGGATTAACAATGGCAGATGATATGAC 6470 | || || |||||||| || | || ||||| | || |||| |||||| | || Sbjct 50276 CCTGATCAAGTTGCATTTTGTTCCATTGTTCAAGGGTCTGACTGTGGCTGATGATCTAAC 50217 Query 6471 AGAAGTGATCAAAAAGATGCTGGAAAGAAGTCAAGGCCAAGGAGAATTAGACTATCAACA 6530 |||||| ||| ||| | || || || ||||||| || || ||| || Sbjct 50216 CACAGTGATGTCAAAAATGATTGAGAGCTCGGCTGGACAAGGAGGATCTGATTATGAAAC 50157 Query 6531 TGTGAGCATAGCGAACCATATAGATTATGAAAAGTGGAACAATCATCAAAGGAAAGAATC 6590 ||| | ||| ||||| ||| |||| || || || ||||| |||||||| |||||||| || Sbjct 50156 TGTCACCATTGCGAATCATGTAGACTACGAGAAATGGAATAATCATCAGAGGAAAGAGTC 50097 Query 6591 AAATGGACCAGTTTTCCGTGTGATGGGCCAATTCTTGGGCTATCCATCTTTGATAGAGAG 6650 || | ||||| ||| | || ||||| |||||| | |||||||| || || | Sbjct 50096 AACAGACCCAGTATTCAGGGTTATGGGGCAATTCCTTGGCTATCCTCACTTAATCACTCG 50037 Query 6651 AACGCATGAGTTCTTTGAGAAAAGTCTTG--TTTATTACAA 6689 || |||||| | ||| |||||||| || | |||||||| Sbjct 50036 GACACATGAGATATTT--GAAAAGTCATGGATCTATTACAA 49998 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 35534678327320