Alignment viewer
BLASTN 2.6.0+
Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A.
Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J.
Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of
protein database search programs", Nucleic Acids Res. 25:3389-3402.
Database: Bactrocera_20latifrons_20[refseq_20GCF_5F001853355.1_202016-10-25]
3,306 sequences; 462,505,359 total letters
Query= NC_028230.1
Length=12020
Score E
Sequences producing significant alignments: (Bits) Value
seq2708 154 1e-33
>seq2708
Length=213413
Score = 154 bits (170), Expect = 1e-33
Identities = 254/364 (70%), Gaps = 2/364 (1%)
Strand=Plus/Minus
Query 7205 AGCAAAAGAAAGGGAGATGAAAAGAATCGGAAGAtttttttCATTAATGTCTTGGGAATT 7264
||| || || ||||| |||| | || |||||||||||| |||| ||||| ||| | |
Sbjct 50363 AGCGAAGGAGCGGGAGTTGAAGACTATAGGAAGATTTTTTGCATTGATGTCCTGGCAGAT 50304
Query 7265 AAGAGAATATTTTGTTTCTACTGAATATCTGATaaaaaaaTATTATGTTCCATTATTCAA 7324
|||| || ||||| |||||||| ||||| || ||| ||||||||| |||||
Sbjct 50303 TCGAGAGTACTTTGTGATGACTGAATACCTGATCAAGTTGCATTTTGTTCCATTGTTCAA 50244
Query 7325 GGGATTGACAATGGCAGATGGATTAATGACAGTGGTGAAGAAAATGATTGATTCATCATG 7384
||| |||| |||| |||| ||| |||||| || ||||||||||| ||
Sbjct 50243 GGGTCTGACTGTGGCTGATGATCTAACCACAGTGATGTCAAAAATGATTGAGAGCTCGGC 50184
Query 7385 CGGGCAAGGA-AATCTAGATTACAACACTGTATCAATTGCCAATCATATAGATTATACAA 7443
|| |||||| |||| ||||| | ||||| | ||||| |||||| |||| || |
Sbjct 50183 TGGACAAGGAGGATCT-GATTATGAAACTGTCACCATTGCGAATCATGTAGACTACGAGA 50125
Query 7444 AGTGGAACAATCACCAGAGAAGGAAGTCCAATCACCCTGTTTTTACTGTGATGGGACAGT 7503
| ||||| ||||| ||||| | |||| | |||| || || | || ||||| || |
Sbjct 50124 AATGGAATAATCATCAGAGGAAAGAGTCAACAGACCCAGTATTCAGGGTTATGGGGCAAT 50065
Query 7504 TTTTGGGGTACCCGAACCTGATCACTAGAACTCATGAGTTCTTCGAAAAAAGCTGGATAT 7563
| | || || || || | |||||| | || |||||| | || ||||| ||||| |
Sbjct 50064 TCCTTGGCTATCCTCACTTAATCACTCGGACACATGAGATATTTGAAAAGTCATGGATCT 50005
Query 7564 ATTA 7567
||||
Sbjct 50004 ATTA 50001
Lambda K H
0.634 0.408 0.912
Gapped
Lambda K H
0.625 0.410 0.780
Effective search space used: 38347373712256
Made in 2017 by Kirill Kryukov This page is placed in public domain using CC0 |